RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CINPQ9BW66 212 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-208ENST00000444533 TPSD1Q9BZJ3 242 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 SEMA4AQ9H3S1 761 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 NOL6Q9H6R4 1146 aaKnown RBP14.37□□□□□ -0.11
SSBP3-208ENST00000444533 HEY1Q9Y5J3 304 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 PPP1R12AO14974 1030 aaPredicted RBP14.36□□□□□ -0.11
SSBP3-208ENST00000444533 NDUFS2O75306 463 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 RPP40O75818 363 aaKnown RBP14.36□□□□□ -0.11
SSBP3-208ENST00000444533 ZMPSTE24O75844 475 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 TMCC1O94876 653 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 IGSF6O95976 241 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 MT-CO1P00395 513 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 IL1BP01584 269 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 PRNPP04156 253 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 NDUFV2P19404 249 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 OXTRP30559 389 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 NR2C2P49116 596 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 DYNLT1P63172 113 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 TCF15Q12870 199 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 ZNF235Q14590 738 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 PDK1Q15118 436 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 C9orf64Q5T6V5 341 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 AFMIDQ63HM1 303 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 NCBP2-AS2Q69YL0 99 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 MFSD7Q6UXD7 560 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 SLC36A4Q6YBV0 504 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 STK40Q8N2I9 435 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 NPWQ8N729 165 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 PAF1Q8N7H5 531 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 FRS2Q8WU20 508 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 P3H4Q92791 437 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 PTPRN2Q92932 1015 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 PPP1R16AQ96I34 528 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 GDAP1L1Q96MZ0 367 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 OMDQ99983 421 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 RSPH9Q9H1X1 276 aaPredicted RBP14.36□□□□□ -0.11
SSBP3-208ENST00000444533 ETNK2Q9NVF9 386 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 FCF1Q9Y324 198 aaKnown RBP14.36□□□□□ -0.11
SSBP3-208ENST00000444533 CAPN6Q9Y6Q1 641 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 ZNF318Q5VUA4 2279 aa14.36□□□□□ -0.11
SSBP3-208ENST00000444533 CACNA1IQ9P0X4 2223 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 K7ERQ8 282 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 MCF2LO15068 1137 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 MFSD11O43934 449 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 KIF5CO60282 957 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 TJP3O95049 919 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 GSRP00390 522 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 TDGF1P13385 188 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 C5AR1P21730 350 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 TGM2P21980 687 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
SSBP3-208ENST00000444533 GARSP41250 739 aaKnown RBP14.35□□□□□ -0.11
SSBP3-208ENST00000444533 CDKN2BP42772 138 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 GRM3Q14832 879 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 RPS6KA1Q15418 735 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 ELF2Q15723 593 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 PPP2R5EQ16537 467 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 CARD16Q5EG05 197 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 SEL1L2Q5TEA6 688 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 LEKR1Q6ZMV7 388 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 KBTBD6Q86V97 674 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 CACUL1Q86Y37 369 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 MMAAQ8IVH4 418 aaKnown RBP14.35□□□□□ -0.11
SSBP3-208ENST00000444533 ARHGAP12Q8IWW6 846 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 PLPP6Q8IY26 295 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 ZBTB44Q8NCP5 570 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 OR2AP1Q8NGE2 309 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 GAB3Q8WWW8 586 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 KRT35Q92764 455 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 HEPHQ9BQS7 1158 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 TM6SF2Q9BZW4 377 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 MKRN2Q9H000 416 aaKnown RBP14.35□□□□□ -0.11
SSBP3-208ENST00000444533 BRD8Q9H0E9 1235 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 HECAQ9UBI9 543 aaPredicted RBP14.35□□□□□ -0.11
SSBP3-208ENST00000444533 SEPT3Q9UH03 358 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 IL36AQ9UHA7 158 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 EFR3BQ9Y2G0 817 aa14.35□□□□□ -0.11
SSBP3-208ENST00000444533 A0A0U1RQJ8 604 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 C3orf70A6NLC5 250 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-208ENST00000444533 J3KR12 359 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 SMAD6O43541 496 aaKnown RBP14.34□□□□□ -0.11
SSBP3-208ENST00000444533 CST8O60676 142 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 RHOBTB1O94844 696 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 POP4O95707 220 aaKnown RBP14.34□□□□□ -0.11
SSBP3-208ENST00000444533 CHRNA3P32297 505 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 MAPK8P45983 427 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 PSMD8P48556 350 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 COPAP53621 1224 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 GALNT2Q10471 571 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 SIM2Q14190 667 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-208ENST00000444533 LBRQ14739 615 aaKnown RBP14.34□□□□□ -0.11
SSBP3-208ENST00000444533 CST6Q15828 149 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 CFAP58Q5T655 872 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 MARC1Q5VT66 337 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 SLC9A4Q6AI14 798 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 PRR23BQ6ZRT6 265 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 NELL1Q92832 810 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 LRIG1Q96JA1 1093 aa14.34□□□□□ -0.11
SSBP3-208ENST00000444533 OSBPL1AQ9BXW6 950 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms