RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 SPRP35270 261 aaPredicted RBP16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 LIMK2P53671 638 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 PCLAFQ15004 111 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 ACSBG2Q5FVE4 666 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 PPM1JQ5JR12 505 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 CNTD1Q8N815 330 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 MFSD3Q96ES6 412 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 SMOC2Q9H3U7 446 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 SNX15Q9NRS6 342 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 LYNP07948 512 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 CCNCP24863 283 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 HTR7P34969 479 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 RPL10AP62906 217 aaKnown RBP16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 ARTNQ5T4W7 220 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 MANEALQ5VSG8 457 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 RWDD4Q6NW29 188 aaKnown RBP16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 STRA8Q7Z7C7 330 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 SPATA2LQ8IUW3 424 aaPredicted RBP16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 DCLK2Q8N568 766 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 WDR60Q8WVS4 1066 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 DCLRE1BQ9H816 532 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 TRMT13Q9NUP7 481 aaKnown RBP16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 SOX13Q9UN79 622 aa16.53■□□□□ 0.24
PIKFYVE-206ENST00000443896 SHROOM3Q8TF72 1996 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 NUP205Q92621 2012 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 AP3B1O00203 1094 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 ATP5BP06576 529 aaKnown RBP16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 KITP10721 976 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 GALK1P51570 392 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 AQP5P55064 265 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 PRPSAP1Q14558 356 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 NAPEPLDQ6IQ20 393 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 ARHGAP12Q8IWW6 846 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 PPP1R14CQ8TAE6 165 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 DTNBP1Q96EV8 351 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 ZIC5Q96T25 663 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 AGAP2Q99490 1192 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 TTC1Q99614 292 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 CADM1Q9BY67 442 aaKnown RBP16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 SIK2Q9H0K1 926 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 MARCOQ9UEW3 520 aaPredicted RBP16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 SQORQ9Y6N5 450 aa16.52■□□□□ 0.24
PIKFYVE-206ENST00000443896 CAPN14A8MX76 684 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 PSMD3O43242 534 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 ATP9BO43861 1147 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 SERPINB8P50452 374 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 CDH17Q12864 832 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 WASHC2DQ5SRD0 308 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 BTBD8Q5XKL5 378 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 PPFIBP2Q8ND30 876 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 APOL2Q9BQE5 337 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 SIKE1Q9BRV8 207 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 CHRAC1Q9NRG0 131 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 TMEM216Q9P0N5 145 aa16.52■□□□□ 0.23
PIKFYVE-206ENST00000443896 PAGE1O75459 146 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 DNAJB2P25686 324 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 PGFP49763 221 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 YWHAHQ04917 246 aaPredicted RBP16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 FSTL4Q6MZW2 842 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 ARHGAP36Q6ZRI8 547 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 STMN2Q93045 179 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 MCMBPQ9BTE3 642 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 UBP1Q9NZI7 540 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 FGF10O15520 208 aaPredicted RBP16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 ITM2AO43736 263 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 CCR1P32246 355 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 GRIK1P39086 918 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 ITGA7Q13683 1181 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 OTOP3Q7RTS5 596 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 CMC1Q7Z7K0 106 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 SCD5Q86SK9 330 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 LINC00523Q86TU6 105 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 KCNMB4Q86W47 210 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 CASP10Q92851 521 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 ARMCX1Q9P291 453 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 COPG2Q9UBF2 871 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 TLL2Q9Y6L7 1015 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 DFFAO00273 331 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 MAP3K7O43318 606 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 PGM3O95394 542 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 SERPINE1P05121 402 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 ESRRAP11474 423 aaPredicted RBP16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 SLC1A6P48664 564 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 THOC5Q13769 683 aaKnown RBP16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 HSP90AA5PQ58FG0 334 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 IZUMO2Q6UXV1 221 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 LZTR1Q8N653 840 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 PCSK9Q8NBP7 692 aaKnown RBP16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 CEP70Q8NHQ1 597 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 SFMBT1Q9UHJ3 866 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 NOD1Q9Y239 953 aa16.51■□□□□ 0.23
PIKFYVE-206ENST00000443896 GSC2O15499 205 aa16.5■□□□□ 0.23
PIKFYVE-206ENST00000443896 TPH1P17752 444 aa16.5■□□□□ 0.23
PIKFYVE-206ENST00000443896 CSE1LP55060 971 aaKnown RBP16.5■□□□□ 0.23
PIKFYVE-206ENST00000443896 CBX3Q13185 183 aa16.5■□□□□ 0.23
PIKFYVE-206ENST00000443896 CCDC153Q494R4 210 aa16.5■□□□□ 0.23
PIKFYVE-206ENST00000443896 RINLQ6ZS11 566 aa16.5■□□□□ 0.23
PIKFYVE-206ENST00000443896 SPATA24Q86W54 205 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms