RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 LTBP3Q9NS15 1303 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MAGEB6P1A0A0J9YX57 407 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TEX51A0A1B0GUA7 166 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 FAM187AA6NFU0 413 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 LRRC53A6NM62 1247 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 A8MUA0 341 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CAPN14A8MX76 684 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 EYA2O00167 538 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PLK4O00444 970 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 KPNA5O15131 536 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 HOXC11O43248 304 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 RIPK2O43353 540 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 DYRK3O43781 588 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SPOPO43791 374 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PRMT3O60678 531 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MAGEC1O60732 1142 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TM7SF2O76062 418 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PIGNO95427 931 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CRTAMO95727 393 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 T-ENOLP0DO92 83 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 RXRAP19793 462 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MAGP20916 626 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 DNAJB1P25685 340 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 KLRC1P26715 233 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 UQCRC1P31930 480 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 L1CAMP32004 1257 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PSMC2P35998 433 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 SERPINB10P48595 397 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 NUMBP49757 651 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 KLK7P49862 253 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ARHGDIBP52566 201 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 NLRP11P59045 1033 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 RPS6P62753 249 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 UBE3AQ05086 875 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PCDH1Q08174 1060 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 LRRC74AQ0VAA2 488 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SELENBP1Q13228 472 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TFDP1Q14186 410 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TLR1Q15399 786 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 DGKDQ16760 1214 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SEL1L2Q5TEA6 688 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 AGAP7PQ5VUJ5 663 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SHEQ5VZ18 495 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZNF425Q6IV72 752 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 BNC2Q6ZN30 1099 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 FKBP9P1Q75LS8 142 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 PRPF39Q86UA1 669 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 IGFN1Q86VF2 1251 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 LRRTM3Q86VH5 581 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC22A16Q86VW1 577 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 GPBP1Q86WP2 473 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC44A2Q8IWA5 706 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 THNSL1Q8IYQ7 743 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ABI1Q8IZP0 508 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MARVELD2Q8N4S9 558 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 C7orf31Q8N865 590 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC4A11Q8NBS3 891 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 ADAMTS16Q8TE57 1224 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TNFRSF25Q93038 417 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 LRRC39Q96DD0 335 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TMA16Q96EY4 203 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 ZNF274Q96GC6 653 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 CNOT6LQ96LI5 555 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 AK8Q96MA6 479 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 QKIQ96PU8 341 aaKnown RBP eCLIP2.82□□□□□ -1.96
LIG4-203ENST00000442234 SECISBP2Q96T21 854 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 MNTQ99583 582 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SEC22CQ9BRL7 303 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 WACQ9BTA9 647 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TSSK1BQ9BXA7 367 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TMEM120AQ9BXJ8 343 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SLC26A6Q9BXS9 759 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CLPBQ9H078 707 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TTYH1Q9H313 450 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 STN1Q9H668 368 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 RMND5AQ9H871 391 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 POLR1BQ9H9Y6 1135 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CXorf21Q9HAI6 301 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CHMP1AQ9HD42 196 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 DNAJC11Q9NVH1 559 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CCDC59Q9P031 241 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 DENND2AQ9ULE3 1009 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 RAB26Q9ULW5 256 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 RNF112Q9ULX5 631 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SMG5Q9UPR3 1016 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 MRPL11Q9Y3B7 192 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 PCDHB4Q9Y5E5 795 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MAGED1Q9Y5V3 778 aaPredicted RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 BTAF1O14981 1849 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 SALL3Q9BXA9 1300 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 DLG5Q8TDM6 1919 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 MYADML2A6NDP7 307 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 M0R3G1 203 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TRDMT1O14717 391 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 GAS2O43903 313 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 EDF1O60869 148 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 WBP4O75554 376 aaKnown RBP2.82□□□□□ -1.96
LIG4-203ENST00000442234 PRKD3O94806 890 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 CTDNEP1O95476 244 aa2.82□□□□□ -1.96
LIG4-203ENST00000442234 TTLL1O95922 423 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms