RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ZNF768Q9H5H4 540 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 GALNT9Q9HCQ5 603 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMEM74BQ9NUR3 256 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 TAB2Q9NYJ8 693 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 CDH22Q9UJ99 828 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC25A13Q9UJS0 675 aa4.3□□□□□ -1.72
CDC42BPA-207ENST00000441725 KIF16BQ96L93 1317 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 A0A0B4J203 849 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 C17orf113A0A1B0GUU1 675 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 TCAF2A6NFQ2 919 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 AFPP02771 609 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 ALDOCP09972 364 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SCG2P13521 617 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SELLP14151 372 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 PKMP14618 531 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 TBXAS1P24557 533 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 CD86P42081 329 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 STAT6P42226 847 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 JAK3P52333 1124 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 RAD23AP54725 363 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 PRAMEP78395 509 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 HHEXQ03014 270 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 ITIH3Q06033 890 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 RESTQ13127 1097 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 AIMP2Q13155 320 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 TNFAIP1Q13829 316 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SPDYE7PQ495Y7 208 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMEM88Q6PEY1 159 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 FIP1L1Q6UN15 594 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 PLPPR4Q7Z2D5 763 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 OR8H3Q8N146 312 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SETD9Q8NE22 299 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 MNS1Q8NEH6 495 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 GOT1L1Q8NHS2 421 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 FAM149B1Q96BN6 582 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 LOXL4Q96JB6 756 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 GSDMAQ96QA5 445 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 IKZF4Q9H2S9 585 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 FBRSL1Q9HCM7 1045 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 LTB4R2Q9NPC1 389 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 CD320Q9NPF0 282 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SPATS2LQ9NUQ6 558 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 ARGLU1Q9NWB6 273 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 KCTD5Q9NXV2 234 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZMAT5Q9UDW3 170 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 CTDSP2O14595 271 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC7A4O43246 635 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SUV39H1O43463 412 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 HBP1O60381 514 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 CSPG5O95196 566 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 C8AP07357 584 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 DUSP1P28562 367 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 FMO4P31512 558 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC8A1P32418 973 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 NRIP1P48552 1158 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 PDE1AP54750 535 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 LINC00310P59036 64 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SMC1AQ14683 1233 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 ERMARDQ5T6L9 678 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZNF618Q5T7W0 954 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 ADALQ6DHV7 355 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 CLEC17AQ6ZS10 378 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 BTN2A1Q7KYR7 527 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 KRTAP1-3Q8IUG1 177 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 CPXM2Q8N436 756 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SIRT6Q8N6T7 355 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 TRIML1Q8N9V2 468 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SRFBP1Q8NEF9 429 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 PGAP3Q96FM1 320 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 C1orf74Q96LT6 269 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 GCNAQ96QF7 691 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 MAP7D2Q96T17 732 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 STRA6Q9BX79 667 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC7A5P2Q9GIP4 190 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 CPSF2Q9P2I0 782 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 UPB1Q9UBR1 384 aa4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 PTRH2Q9Y3E5 179 aaKnown RBP4.29□□□□□ -1.72
CDC42BPA-207ENST00000441725 FLT1P17948 1338 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 ADGRA2Q96PE1 1338 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 HECW2Q9P2P5 1572 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 A8MXE2 369 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 DSCR3O14972 297 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 CCNT1O60563 726 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 CDKL5O76039 1030 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 FARP2O94887 1054 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 C1QTNF9P0C862 333 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 GABRB1P18505 474 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 SAT1P21673 171 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 TYK2P29597 1187 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC15A1P46059 708 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 MRPL12P52815 198 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMF1P82094 1093 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 PSG6Q00889 435 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 RRP1BQ14684 758 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 PCLAFQ15004 111 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 SF3B3Q15393 1217 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 DPCR1Q3MIW9 517 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 KIAA0930Q6ICG6 404 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 SARM1Q6SZW1 724 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 POLNQ7Z5Q5 900 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms