RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 MCF2P10911 925 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 TYK2P29597 1187 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 ATXN3P54252 364 aaPredicted RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 CDH15P55291 814 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 BCAR1P56945 870 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 CTBSQ01459 385 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 PPP6R3Q5H9R7 873 aaPredicted RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 TMEM53Q6P2H8 277 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 NAPRTQ6XQN6 538 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 OR6J1Q8NGC5 347 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 CHPT1Q8WUD6 406 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 SREK1Q8WXA9 508 aaKnown RBP12.09□□□□□ -0.47
LTBR-203ENST00000441074 CPXM1Q96SM3 734 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 DCUN1D5Q9BTE7 237 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 BCO2Q9BYV7 579 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 C2orf40Q9H1Z8 148 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 ZNF385DQ9H6B1 395 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 VTA1Q9NP79 307 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 SLC17A6Q9P2U8 582 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 DOLKQ9UPQ8 538 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 HEY1Q9Y5J3 304 aa12.09□□□□□ -0.47
LTBR-203ENST00000441074 A0A087WZ62 844 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 GOLGA8QA0A0J9YX86 632 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 WDR27A2RRH5 827 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 GOLGA8OA6NCC3 632 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 GOLGA8NF8WBI6 632 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 STX16-NPEPL1H3BU86 382 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 HTRA2O43464 458 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 H2AFYO75367 372 aaKnown RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 IL4RP24394 825 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 ZNF143P52747 638 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 HK2P52789 917 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 TNFAIP2Q03169 654 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 KCNC4Q03721 635 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 PDK2Q15119 407 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 LSM12Q3MHD2 195 aaKnown RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 DUSP28Q4G0W2 176 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 MORN1Q5T089 497 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 MARCH8Q5T0T0 291 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 IER5Q5VY09 327 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 EEF1DP3Q658K8 133 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 NIPAL1Q6NVV3 410 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 CCDC80Q76M96 950 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 MYO1HQ8N1T3 1032 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 CENPSQ8N2Z9 138 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 PQLC3Q8N755 202 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 CNTD1Q8N815 330 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 ZNF420Q8TAQ5 688 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 TBC1D15Q8TC07 691 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 STON2Q8WXE9 905 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 TOP1MTQ969P6 601 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 ASB9Q96DX5 294 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 CPB2Q96IY4 423 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 FAM167AQ96KS9 214 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 DOK1Q99704 481 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 FDXACB1Q9BRP7 624 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 CNPY3Q9BT09 278 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 ILKAPQ9H0C8 392 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 SEMA6AQ9H2E6 1030 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 ABHD16BQ9H3Z7 469 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 WDR55Q9H6Y2 383 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 PALMDQ9NP74 551 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 RNF19AQ9NV58 838 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 AKT3Q9Y243 479 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 LRRC37A2A6NM11 1700 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 HDAC3O15379 428 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 HBP1O60381 514 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 IL18RAPO95256 599 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 ZBTB11O95625 1053 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 HMGCRP04035 888 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 PRKCBP05771 671 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 MMP3P08254 477 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 GRIA1P42261 906 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 SP3Q02447 781 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 MXD4Q14582 209 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 STILQ15468 1287 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 ZNF667Q5HYK9 610 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 SLC9A4Q6AI14 798 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 LYSMD3Q7Z3D4 306 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 CDKL3Q8IVW4 592 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 LRTOMTQ8WZ04 291 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 SLC29A1Q99808 456 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 ADPGKQ9BRR6 497 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 GPATCH1Q9BRR8 931 aaKnown RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 FAM49AQ9H0Q0 323 aaPredicted RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 MRPL40Q9NQ50 206 aaKnown RBP12.08□□□□□ -0.48
LTBR-203ENST00000441074 ZNF358Q9NW07 568 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 MTMR10Q9NXD2 777 aa12.08□□□□□ -0.48
LTBR-203ENST00000441074 G3V2L1 256 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 PLOD2O00469 737 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 TRIM13O60858 407 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 ATE1O95260 518 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 VAPBO95292 243 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 ESRRBO95718 433 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms