RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 LMAN2Q12907 356 aa28.44■■■□□ 2.14
CGREF1-207ENST00000440612 KYNUQ16719 465 aa28.44■■■□□ 2.14
CGREF1-207ENST00000440612 PDIK1LQ8N165 341 aa28.44■■■□□ 2.14
CGREF1-207ENST00000440612 ZBTB9Q96C00 473 aa28.44■■■□□ 2.14
CGREF1-207ENST00000440612 ASIC4Q96FT7 647 aa28.44■■■□□ 2.14
CGREF1-207ENST00000440612 C9orf72Q96LT7 481 aa28.44■■■□□ 2.14
CGREF1-207ENST00000440612 NT5MQ9NPB1 228 aa28.44■■■□□ 2.14
CGREF1-207ENST00000440612 MARK1Q9P0L2 795 aa28.44■■■□□ 2.14
CGREF1-207ENST00000440612 TTC4O95801 387 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 SPARCL1Q14515 664 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 ATAT1Q5SQI0 421 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 LY6G5CQ5SRR4 150 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 HP1BP3Q5SSJ5 553 aaPredicted RBP28.43■■■□□ 2.14
CGREF1-207ENST00000440612 ALS2CLQ60I27 953 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 ASTLQ6HA08 431 aaPredicted RBP28.43■■■□□ 2.14
CGREF1-207ENST00000440612 PPP1R21Q6ZMI0 780 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 CEP128Q6ZU80 1094 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 IGDCC3Q8IVU1 814 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 APCDD1Q8J025 514 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 CLDND1Q9NY35 253 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 FAM53CQ9NYF3 392 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 UBP1Q9NZI7 540 aa28.43■■■□□ 2.14
CGREF1-207ENST00000440612 CBX4O00257 560 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 CYBBP04839 570 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 CD70P32970 193 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 NIPAL4Q0D2K0 466 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 SLC29A2Q14542 456 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 CFAP58Q5T655 872 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 PRPF39Q86UA1 669 aaKnown RBP28.42■■■□□ 2.14
CGREF1-207ENST00000440612 ZBED8Q8IZ13 594 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 ARRDC2Q8TBH0 407 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 OSCP1Q8WVF1 389 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 TADA1Q96BN2 335 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 IMP4Q96G21 291 aaKnown RBP28.42■■■□□ 2.14
CGREF1-207ENST00000440612 MYADMQ96S97 322 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 SLC25A51Q9H1U9 297 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 INTS6Q9UL03 887 aaKnown RBP28.42■■■□□ 2.14
CGREF1-207ENST00000440612 PLAAQ9Y263 795 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 TEX264Q9Y6I9 313 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 SLC9A3R1O14745 358 aaPredicted RBP28.42■■■□□ 2.14
CGREF1-207ENST00000440612 MT-CYBP00156 380 aaPredicted RBP28.42■■■□□ 2.14
CGREF1-207ENST00000440612 MMP2P08253 660 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 NUDT17P0C025 328 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 MAXP61244 160 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 MLLT1Q03111 559 aaPredicted RBP28.42■■■□□ 2.14
CGREF1-207ENST00000440612 EML3Q32P44 896 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 LRRC8BQ6P9F7 803 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.42■■■□□ 2.14
CGREF1-207ENST00000440612 ST13P5Q8NFI4 369 aaPredicted RBP28.42■■■□□ 2.14
CGREF1-207ENST00000440612 BBS2Q9BXC9 721 aa28.42■■■□□ 2.14
CGREF1-207ENST00000440612 ERI2A8K979 691 aaKnown RBP28.41■■■□□ 2.14
CGREF1-207ENST00000440612 MLNP12872 115 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 HLA-FP30511 346 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 PLK1P53350 603 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 CYTH1Q15438 398 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 BBS9Q3SYG4 887 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 ALG1LQ6GMV1 187 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 DCAF4L2Q8NA75 395 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 OR2W6PQ8NHA6 318 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 BPIFB1Q8TDL5 484 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 NSMCE1Q8WV22 266 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 SIGLEC10Q96LC7 697 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 LRRC4CQ9HCJ2 640 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 XAB2Q9HCS7 855 aaKnown RBP28.41■■■□□ 2.14
CGREF1-207ENST00000440612 OBP2AQ9NY56 170 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 KIAA1522Q9P206 1035 aaPredicted RBP28.41■■■□□ 2.14
CGREF1-207ENST00000440612 UBA2Q9UBT2 640 aaPredicted RBP28.41■■■□□ 2.14
CGREF1-207ENST00000440612 VPS51Q9UID3 782 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 VPS28Q9UK41 221 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 TTLL3Q9Y4R7 772 aa28.41■■■□□ 2.14
CGREF1-207ENST00000440612 HEPACAM2A8MVW5 462 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 NEDD8-MDP1E9PL57 170 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 SHBGP04278 402 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 TRIM68Q6AZZ1 485 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 TANGO2Q6ICL3 276 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 CES5AQ6NT32 575 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 ANKMY2Q8IV38 441 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 PSKH2Q96QS6 385 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 DUS2Q9NX74 493 aaKnown RBP28.4■■■□□ 2.14
CGREF1-207ENST00000440612 DOCK8Q8NF50 2099 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 MYOFQ9NZM1 2061 aa28.4■■■□□ 2.14
CGREF1-207ENST00000440612 GOLGA6BA6NDN3 693 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 USP12O75317 370 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 GJB3O75712 270 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 ACSL3O95573 720 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 CYP17A1P05093 508 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 TYRP14679 529 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 LMAN1P49257 510 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 DSC2Q02487 901 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 RFTN1Q14699 578 aaPredicted RBP28.39■■■□□ 2.14
CGREF1-207ENST00000440612 KDELC1Q6UW63 502 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 LINGO4Q6UY18 593 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 PLAC1Q9HBJ0 212 aa28.39■■■□□ 2.14
CGREF1-207ENST00000440612 AAR2Q9Y312 384 aaKnown RBP28.39■■■□□ 2.14
CGREF1-207ENST00000440612 TTC24A2A3L6 582 aaPredicted RBP28.38■■■□□ 2.13
CGREF1-207ENST00000440612 ADRA1AP35348 466 aa28.38■■■□□ 2.13
CGREF1-207ENST00000440612 ELK3P41970 407 aa28.38■■■□□ 2.13
CGREF1-207ENST00000440612 GPX6P59796 221 aa28.38■■■□□ 2.13
CGREF1-207ENST00000440612 PRPSAP1Q14558 356 aa28.38■■■□□ 2.13
CGREF1-207ENST00000440612 DHCR24Q15392 516 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms