RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PRDX6P30041 224 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 L1CAMP32004 1257 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 EPHX2P34913 555 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 NR2C2P49116 596 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 LIMK2P53671 638 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 SEMA5AQ13591 1074 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 IKBKEQ14164 716 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 PCSK7Q16549 785 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 INSCQ1MX18 579 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 PERM1Q5SV97 790 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 NBPF12Q5TAG4 269 aaPredicted RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 STYK1Q6J9G0 422 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 DUS1LQ6P1R4 473 aaKnown RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 TIFABQ6ZNK6 161 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 SAMD7Q7Z3H4 446 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 SPNS2Q8IVW8 549 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ZNF567Q8N184 647 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 OR9I1Q8NGQ6 314 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 FNDC8Q8TC99 324 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 RNF139Q8WU17 664 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 C12orf43Q96C57 262 aaKnown RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 FAM167AQ96KS9 214 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 FCRL3Q96P31 734 aaPredicted RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 QKIQ96PU8 341 aaKnown RBP eCLIP9.19□□□□□ -0.947e-9■■■■■ 37.3
COPB1-202ENST00000439561 SLC29A1Q99808 456 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 MRPL45Q9BRJ2 306 aaKnown RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 CXorf21Q9HAI6 301 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 RIMS3Q9UJD0 308 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 AFG3L2Q9Y4W6 797 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 CEPT1Q9Y6K0 416 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ANKRD12Q6UB98 2062 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 TMEM114B3SHH9 223 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 PMPCBO75439 489 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 BFSP2Q13515 415 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 TRIM25Q14258 630 aaKnown RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 INPP5AQ14642 412 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 ATG14Q6ZNE5 492 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 CROCCP3Q8IVE0 287 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 NAT16Q8N8M0 369 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 SMYD1Q8NB12 490 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 ZNF280CQ8ND82 737 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 ACVR1CQ8NER5 493 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 PPP1R13LQ8WUF5 828 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 NXNL1Q96CM4 212 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 PKD2L2Q9NZM6 624 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 SFMBT1Q9UHJ3 866 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 C7orf72A4D263 438 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 TRIM43BA6NCK2 446 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 MATN2O00339 956 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 BCAS2O75934 225 aaPredicted RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 PIGRP01833 764 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 PGK2P07205 417 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 BACE1P56817 501 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 NR1D2Q14995 579 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 PIGGQ5H8A4 983 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 TMEM26Q6ZUK4 368 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 SPPL2CQ8IUH8 684 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 CPNE9Q8IYJ1 553 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 FSTL5Q8N475 847 aaPredicted RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 TMCO5AQ8N6Q1 288 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 OR6P1Q8NGX9 317 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 CANT1Q8WVQ1 401 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 KBTBD7Q8WVZ9 684 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 FSD1LQ9BXM9 530 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 TRIM8Q9BZR9 551 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 SOX17Q9H6I2 414 aaPredicted RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 SPAG4Q9NPE6 437 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 FNDC3AQ9Y2H6 1198 aaKnown RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 GMEB1Q9Y692 573 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 ADGRA2Q96PE1 1338 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 ADAMTSL1Q8N6G6 1762 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 FAM189A1O60320 539 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 B4GALT4O60513 344 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 H2AFYO75367 372 aaKnown RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 MAFO75444 373 aaPredicted RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 APOA4P06727 396 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 PSMA4P25789 261 aaKnown RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 CDK9P50750 372 aaKnown RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 GNA12Q03113 381 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 ADIGQ0VDE8 80 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 CAPRIN1Q14444 709 aaKnown RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 KIZQ2M2Z5 673 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 CCDC92Q53HC0 331 aaPredicted RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 NCBP2-AS2Q69YL0 99 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 GADL1Q6ZQY3 521 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 ZBTB8BQ8NAP8 495 aaPredicted RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 BEGAINQ9BUH8 593 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 MINDY3Q9H8M7 445 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 CYP3A43Q9HB55 503 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 GID8Q9NWU2 228 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 KLK14Q9P0G3 267 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 DSEQ9UL01 958 aa9.18□□□□□ -0.94
COPB1-202ENST00000439561 MAFBQ9Y5Q3 323 aaPredicted RBP9.18□□□□□ -0.94
COPB1-202ENST00000439561 PLOD2O00469 737 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 ITGBL1O95965 494 aaPredicted RBP9.17□□□□□ -0.94
COPB1-202ENST00000439561 NFKB1P19838 968 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 MPP1Q00013 466 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 TNFAIP2Q03169 654 aa9.17□□□□□ -0.94
COPB1-202ENST00000439561 ENPEPQ07075 957 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms