RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ATF7IP2Q5U623 682 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 METTL21CQ5VZV1 264 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 OGFOD2Q6N063 350 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 Q6ZNX1 250 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 LZTR1Q8N653 840 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 C12orf43Q96C57 262 aaKnown RBP13.77□□□□□ -0.21
PCNX3-202ENST00000439247 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 RMND5BQ96G75 393 aaPredicted RBP13.77□□□□□ -0.21
PCNX3-202ENST00000439247 ZNF597Q96LX8 424 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 SPATA13Q96N96 652 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 GPBP1L1Q9HC44 474 aaPredicted RBP13.77□□□□□ -0.21
PCNX3-202ENST00000439247 ZBTB26Q9HCK0 441 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 A0A0G2JMZ2 1700 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 SOCS2O14508 198 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 ATE1O95260 518 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 MT-CO1P00395 513 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 TARBP2Q15633 366 aaKnown RBP13.77□□□□□ -0.21
PCNX3-202ENST00000439247 C1QTNF12Q5T7M4 302 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 ACOT1Q86TX2 421 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 FAM131BQ86XD5 332 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 HERC6Q8IVU3 1022 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 PPWD1Q96BP3 646 aaKnown RBP13.77□□□□□ -0.21
PCNX3-202ENST00000439247 ISOC1Q96CN7 298 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 P2RY11Q96G91 374 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 CNDP1Q96KN2 507 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 HAUS8Q9BT25 410 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 ACE2Q9BYF1 805 aaPredicted RBP13.77□□□□□ -0.21
PCNX3-202ENST00000439247 OSBPL6Q9BZF3 934 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 NAA50Q9GZZ1 169 aaKnown RBP13.77□□□□□ -0.21
PCNX3-202ENST00000439247 PAIP1Q9H074 479 aaKnown RBP13.77□□□□□ -0.21
PCNX3-202ENST00000439247 CXCL16Q9H2A7 254 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 EFCAB1Q9HAE3 211 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 OXSMQ9NWU1 459 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 THEGQ9P2T0 379 aa13.77□□□□□ -0.21
PCNX3-202ENST00000439247 ANK1P16157 1881 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 SH3PXD2BA1X283 911 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 FAM149AA5PLN7 773 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 SAC3D1A6NKF1 404 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 POLBP06746 335 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 VDRP11473 427 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 FKBP1BP68106 108 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 GRM1Q13255 1194 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 MPP3Q13368 585 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 KIZQ2M2Z5 673 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 LSMEM2Q8N112 164 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
PCNX3-202ENST00000439247 CCNYL1Q8N7R7 359 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 LPGAT1Q92604 370 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 SCYL1Q96KG9 808 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 CDT1Q9H211 546 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 ZNF385DQ9H6B1 395 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 MORF4L1Q9UBU8 362 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 PCDHGA7Q9Y5G6 932 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 B4GALT4O60513 344 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 CAPNS1P04632 268 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 TXNL4AP83876 142 aaKnown RBP13.76□□□□□ -0.21
PCNX3-202ENST00000439247 SFSWAPQ12872 951 aaKnown RBP13.76□□□□□ -0.21
PCNX3-202ENST00000439247 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
PCNX3-202ENST00000439247 GLRA4Q5JXX5 417 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 CERCAMQ5T4B2 595 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 IL31Q6EBC2 164 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 CYS1Q717R9 158 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 ZNF786Q8N393 782 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 HPDLQ96IR7 371 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 CPNE1Q99829 537 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 NIFKQ9BYG3 293 aaKnown RBP13.76□□□□□ -0.21
PCNX3-202ENST00000439247 RPF1Q9H9Y2 349 aaKnown RBP13.76□□□□□ -0.21
PCNX3-202ENST00000439247 TLL2Q9Y6L7 1015 aa13.76□□□□□ -0.21
PCNX3-202ENST00000439247 LCTP09848 1927 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PRORSD1PA6NEY8 169 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 ZNF839A8K0R7 811 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PSMD12O00232 456 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 HTRA2O43464 458 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 ZNF189O75820 626 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PGK2P07205 417 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 GABRB3P28472 473 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 GARSP41250 739 aaKnown RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 HSPA13P48723 471 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 STAT5BP51692 787 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PSME3P61289 254 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 NSUN2Q08J23 767 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 AMHR2Q16671 573 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 SOWAHAQ2M3V2 549 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CHST15Q7LFX5 561 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 ZNF567Q8N184 647 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 TMEM151AQ8N4L1 468 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 KCTD4Q8WVF5 259 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 DUS2Q9NX74 493 aaKnown RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CDYLQ9Y232 598 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 RAP2CQ9Y3L5 183 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 RXRGP48443 463 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 ZNF157P51786 506 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 LIMK2P53671 638 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PITX1P78337 314 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 SLC6A3Q01959 620 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CD300CQ08708 224 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 DGKDQ16760 1214 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 GRTP1Q5TC63 336 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms