RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CDH5P33151 784 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CYP2C18P33260 490 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 GRIA3P42263 894 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 C16orf72Q14CZ0 275 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CYP51A1Q16850 503 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ARL13AQ5H913 290 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ANKS6Q68DC2 871 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DPY19L2P1Q6NXN4 242 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ADCK1Q86TW2 530 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 IGDCC3Q8IVU1 814 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DHRSXQ8N5I4 330 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF781Q8N8C0 355 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 SKA1Q96BD8 255 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ASIC4Q96FT7 647 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 NSMCE2Q96MF7 247 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ASB2Q96Q27 587 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 SEPHS2Q99611 448 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 KCTD14Q9BQ13 255 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DUSP16Q9BY84 665 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ZCWPW1Q9H0M4 648 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ABHD16BQ9H3Z7 469 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 GBA2Q9HCG7 927 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PNPLA8Q9NP80 782 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DERAQ9Y315 318 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 RAD54BQ9Y620 910 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 MARF1Q9Y4F3 1742 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 MYH4Q9Y623 1939 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ADAMTSL3P82987 1691 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 LRP5O75197 1615 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 FAM159BA6NKW6 160 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CLDN5O00501 218 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 KDM1AO60341 852 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 AP2A1O95782 977 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 HOXB8P17481 243 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 SP2Q02086 613 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TWF1Q12792 350 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PEX6Q13608 980 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ATP6AP1LQ52LC2 224 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TEX44Q53QW1 395 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 FAM182AQ5T1J6 154 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 OTUD3Q5T2D3 398 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TAF2Q6P1X5 1199 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TFAP2DQ7Z6R9 452 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PLEKHH3Q7Z736 793 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 DEFB132Q7Z7B7 95 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF567Q8N184 647 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PYROXD2Q8N2H3 581 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 MPP5Q8N3R9 675 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 FBXO39Q8N4B4 442 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CCDC185Q8N715 623 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 OSCP1Q8WVF1 389 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 C18orf25Q96B23 403 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 MFSD3Q96ES6 412 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 C12orf42Q96LP6 360 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 NPAS2Q99743 824 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 BDH2Q9BUT1 245 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 STK39Q9UEW8 545 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF229Q9UJW7 825 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 DSEQ9UL01 958 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 AK5Q9Y6K8 562 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PRKCHP24723 683 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 GRIA1P42261 906 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PCYT1AP49585 367 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 SERPINH1P50454 418 aaKnown RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CLCN5P51795 746 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF132P52740 706 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 AQP4P55087 323 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ILF2Q12905 390 aaKnown RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 FOXD4Q12950 439 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 DPYSL2Q16555 572 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 SGO1Q5FBB7 561 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TREML2Q5T2D2 321 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 C9orf57Q5W0N0 161 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 FSTL4Q6MZW2 842 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 POTEHQ6S545 545 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 AMIGO2Q86SJ2 522 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TMEM192Q8IY95 271 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PGAM4Q8N0Y7 254 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TMEM86AQ8N2M4 240 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 SPATA6LQ8N4H0 392 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 HASPINQ8TF76 798 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CINPQ9BW66 212 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 OSBPL11Q9BXB4 747 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PAIP1Q9H074 479 aaKnown RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ALG9Q9H6U8 611 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CHRAC1Q9NRG0 131 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TUBGCP4Q9UGJ1 667 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PPM1HQ9ULR3 514 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 SOWAHBA6NEL2 793 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ZBTB24O43167 697 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CRTAMO95727 393 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 COL6A2P12110 1019 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 BDNFP23560 247 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ADSLP30566 484 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 OR1G1P47890 313 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 AIF1P55008 147 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 EFEMP1Q12805 493 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TRIM16LQ309B1 348 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 MGAT5BQ3V5L5 792 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PPP1R15BQ5SWA1 713 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms