RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 ZC3H12AQ5D1E8 599 aaKnown RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 PIP5KL1Q5T9C9 394 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 FOXD4L5Q5VV16 416 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 CRTC1Q6UUV9 634 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 GCNT7Q6ZNI0 430 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 PTAR1Q7Z6K3 402 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 ABI3BPQ7Z7G0 1075 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 CLEC14AQ86T13 490 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 TAC4Q86UU9 113 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 HORMAD1Q86X24 394 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 CIR1Q86X95 450 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 SLC22A18ASQ8N1D0 253 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 ZNF548Q8NEK5 533 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 WDR36Q8NI36 951 aaKnown RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 FAM174AQ8TBP5 190 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 FOXD4L4Q8WXT5 416 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 BTN2A3PQ96KV6 586 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 HSFY1Q96LI6 401 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 SLC12A6Q9UHW9 1150 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 IPO11Q9UI26 975 aaKnown RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 ATXN7L1Q9ULK2 861 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-212ENST00000436564 MYLKQ15746 1914 aa11.13□□□□□ -0.63
COPS7B-212ENST00000436564 PMS2P1A4D2B8 440 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 EME2A4GXA9 379 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-212ENST00000436564 KPNA3O00505 521 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-212ENST00000436564 EFSO43281 561 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 SART1O43290 800 aaKnown RBP11.12□□□□□ -0.63
COPS7B-212ENST00000436564 CSF2P04141 144 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 ITGA2BP08514 1039 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 EPB41P11171 864 aaKnown RBP11.12□□□□□ -0.63
COPS7B-212ENST00000436564 SFTPCP11686 197 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 TBXAS1P24557 533 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-212ENST00000436564 INHBCP55103 352 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 SH3BP2P78314 561 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 LRMPQ12912 555 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 NR0B2Q15466 257 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 CNGA2Q16280 664 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 DEFB133Q30KQ1 61 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 LINC00303Q3SY05 128 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 CBWD6Q4V339 395 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 DCAF17Q5H9S7 520 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-212ENST00000436564 CBWD3Q5JTY5 395 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 RABGAP1LQ5R372 815 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 CBWD5Q5RIA9 395 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 TTC39BQ5VTQ0 682 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-212ENST00000436564 TCERG1LQ5VWI1 586 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 OR6B2Q6IFH4 312 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 ATP6V0D2Q8N8Y2 350 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 TFAP2BQ92481 460 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 EXTL1Q92935 676 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 SGF29Q96ES7 293 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 CCDC114Q96M63 670 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 IL12RB2Q99665 862 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 TRIM62Q9BVG3 475 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 SYNDIG1Q9H7V2 258 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 ST7Q9NRC1 585 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 STARD5Q9NSY2 213 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 SEPT3Q9UH03 358 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 SALL4Q9UJQ4 1053 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 CSNK1G3Q9Y6M4 447 aa11.12□□□□□ -0.63
COPS7B-212ENST00000436564 CCDC187A0A096LP49 1063 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 TCAF2A6NFQ2 919 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 KCNU1A8MYU2 1149 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 MUSKO15146 869 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 CETN3O15182 167 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 AQP9O43315 295 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 SUV39H1O43463 412 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 RHOBTB3O94955 611 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 ITGB2P05107 769 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 PAEPP09466 180 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 NME1P15531 152 aaKnown RBP11.11□□□□□ -0.63
COPS7B-212ENST00000436564 CHRNA3P32297 505 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 MCCD1P59942 119 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-212ENST00000436564 FZD2Q14332 565 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 STILQ15468 1287 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 LINC01559Q495D7 138 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 SEL1L3Q68CR1 1132 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 CXorf57Q6NSI4 855 aaKnown RBP11.11□□□□□ -0.63
COPS7B-212ENST00000436564 C14orf80Q86SX3 495 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 PARGQ86W56 976 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 GUF1Q8N442 669 aaKnown RBP11.11□□□□□ -0.63
COPS7B-212ENST00000436564 SH2D3CQ8N5H7 860 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 WDR48Q8TAF3 677 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 LMX1AQ8TE12 382 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 GLMNQ92990 594 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 MRGPRX2Q96LB1 330 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 BMFQ96LC9 184 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 RPRD1AQ96P16 312 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-212ENST00000436564 FEM1AQ9BSK4 669 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.11□□□□□ -0.63
COPS7B-212ENST00000436564 USP25Q9UHP3 1055 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 VPS28Q9UK41 221 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 ZFR2Q9UPR6 939 aaKnown RBP11.11□□□□□ -0.63
COPS7B-212ENST00000436564 PCDHB4Q9Y5E5 795 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 HS3ST3A1Q9Y663 406 aa11.11□□□□□ -0.63
COPS7B-212ENST00000436564 SPTY2D1-AS1A0A0U1RR47 76 aa11.1□□□□□ -0.63
COPS7B-212ENST00000436564 POM121BA6NF01 834 aa11.1□□□□□ -0.63
COPS7B-212ENST00000436564 TPP1O14773 563 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms