RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CNPY1Q3B7I2 92 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 TCHHL1Q5QJ38 904 aaPredicted RBP10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 HPS6Q86YV9 775 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 TMEM151AQ8N4L1 468 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 NTAN1Q96AB6 310 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 VPS39Q96JC1 886 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 DNAJC1Q96KC8 554 aaKnown RBP10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 MCMBPQ9BTE3 642 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 GATA5Q9BWX5 397 aaPredicted RBP10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 DNAJC28Q9NX36 388 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 SLC39A10Q9ULF5 831 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 PCDHB12Q9Y5F1 795 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 ITGAXP20702 1163 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 GABRB3P28472 473 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 AVPR1AP37288 418 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 CRYBB1P53674 252 aaPredicted RBP10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 PCBP1Q15365 356 aaKnown RBP eCLIP10.59□□□□□ -0.712e-6■■■■■ 32.7
CLSTN1-203ENST00000435891 SPATA6LQ8N4H0 392 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 SLC9A7Q96T83 725 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 APBA2Q99767 749 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 BUD23O43709 281 aaKnown RBP10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 KLHL2O95198 593 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 HSPA4LO95757 839 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 SRGAP2BP0DMP2 458 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 MPSTP25325 297 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 PGFP49763 221 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 GALNT2Q10471 571 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 CCNIQ14094 377 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 RAB41Q5JT25 222 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 OR52E8Q6IFG1 317 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 ISLR2Q6UXK2 745 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 DEFB107AQ8IZN7 70 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 PNPLA1Q8N8W4 532 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 HDAC11Q96DB2 347 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 SIKE1Q9BRV8 207 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 CDH19Q9H159 772 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 WDCPQ9H6R7 721 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 NMRAL1Q9HBL8 299 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 DDX18Q9NVP1 670 aaKnown RBP10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 PDP2Q9P2J9 529 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 SORCS3Q9UPU3 1222 aa10.59□□□□□ -0.71
CLSTN1-203ENST00000435891 NEMP1O14524 444 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 CCDC153Q494R4 210 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 EPGNQ6UW88 154 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 TAC4Q86UU9 113 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 MPP4Q96JB8 637 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 TEKT5Q96M29 485 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 CLIC5Q9NZA1 410 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 CDH22Q9UJ99 828 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 TMCO1Q9UM00 188 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 JUNP05412 331 aaKnown RBP10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 CTSHP09668 335 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 CDC16Q13042 620 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 FAM110CQ1W6H9 321 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 PPM1LQ5SGD2 360 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 FAM219BQ5XKK7 198 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 PGM2L1Q6PCE3 622 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 DENND6AQ8IWF6 608 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 GATA6Q92908 595 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 RTP3Q9BQQ7 232 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 FTHL17Q9BXU8 183 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 SIK2Q9H0K1 926 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 STN1Q9H668 368 aaKnown RBP10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 CNGB3Q9NQW8 809 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 NDFIP2Q9NV92 336 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 NDE1Q9NXR1 346 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 ANGPTL2Q9UKU9 493 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 MYADML2A6NDP7 307 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 C9IYK1 514 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 ATP5BP06576 529 aaKnown RBP10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 SCNN1GP51170 649 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 GJA9P57773 515 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 AP2B1P63010 937 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 C6orf163Q5TEZ5 329 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 FOXB2Q5VYV0 432 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 LPCAT4Q643R3 524 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 MFSD6LQ8IWD5 586 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 SCAMP5Q8TAC9 235 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 SLC26A7Q8TE54 656 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 HASPINQ8TF76 798 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 LENG8Q96PV6 779 aaPredicted RBP10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 TMEM209Q96SK2 561 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 C1QTNF1Q9BXJ1 281 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 S100A14Q9HCY8 104 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 TMLHEQ9NVH6 421 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 ADAMTS6Q9UKP5 1117 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
CLSTN1-203ENST00000435891 BDNFP23560 247 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 EPHA3P29320 983 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 SERPINB5P36952 375 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 CTBP1Q13363 440 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 TIGD5Q53EQ6 642 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 GRAMD4Q6IC98 578 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 KDELC2Q7Z4H8 507 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 TDRD5Q8NAT2 981 aaKnown RBP10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 ADAM28Q9UKQ2 775 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 NEU3Q9UQ49 428 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 C17orf102A2RUQ5 167 aa10.57□□□□□ -0.72
CLSTN1-203ENST00000435891 CCNT2O60583 730 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms