RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 MROH8Q9H579 483 aa4.24□□□□□ -1.73
LINC00353-201ENST00000435401 HDAC6Q9UBN7 1215 aa4.24□□□□□ -1.73
LINC00353-201ENST00000435401 SLC13A4Q9UKG4 626 aa4.24□□□□□ -1.73
LINC00353-201ENST00000435401 GDAQ9Y2T3 454 aa4.24□□□□□ -1.73
LINC00353-201ENST00000435401 PKP3Q9Y446 797 aa4.24□□□□□ -1.73
LINC00353-201ENST00000435401 CKAP5Q14008 2032 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 A0A1W2PPC1 479 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 TCRBV7S3A2A0A539 114 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 SAC3D1A6NKF1 404 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 EPB41L2O43491 1005 aaKnown RBP4.23□□□□□ -1.73
LINC00353-201ENST00000435401 CD4P01730 458 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 WEE2P0C1S8 567 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 TYK2P29597 1187 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ARRB2P32121 409 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 GGT5P36269 586 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ADPRHP54922 357 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 P2RX3P56373 397 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ARHGAP8P85298 464 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 MPP1Q00013 466 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.23□□□□□ -1.73
LINC00353-201ENST00000435401 GALNT2Q10471 571 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 AP5B1Q2VPB7 878 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 NAPEPLDQ6IQ20 393 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 DENND1BQ6P3S1 775 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 TRAPPC11Q7Z392 1133 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 IQCF1Q8N6M8 205 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ARL14EPQ8N8R7 260 aaPredicted RBP4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ADPRHL1Q8NDY3 354 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ZUFSPQ96AP4 578 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 FAM84BQ96KN1 310 aaPredicted RBP4.23□□□□□ -1.73
LINC00353-201ENST00000435401 CLSTN3Q9BQT9 956 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 AGXT2Q9BYV1 514 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 FRMD8Q9BZ67 464 aaPredicted RBP4.23□□□□□ -1.73
LINC00353-201ENST00000435401 UBA5Q9GZZ9 404 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 PAIP1Q9H074 479 aaKnown RBP4.23□□□□□ -1.73
LINC00353-201ENST00000435401 TXNRD2Q9NNW7 524 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 TXLNGQ9NUQ3 528 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ARL15Q9NXU5 204 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ZNF69Q9UC07 566 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 SLC25A13Q9UJS0 675 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 ARHGAP26Q9UNA1 814 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 UNC13AQ9UPW8 1703 aa4.23□□□□□ -1.73
LINC00353-201ENST00000435401 SPATA31A5Q5VU36 1347 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 EMSYQ7Z589 1322 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 SPATA31A7Q8IWB4 1347 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 CXorf65A6NEN9 183 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 FAM90A7PA6NKC0 464 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 FAM90A22PA8MWA6 464 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 FAM90A12PA8MX19 464 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 FAM90A23PA8MXZ1 464 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 MCIDASD6RGH6 385 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 TSPAN3O60637 253 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 ATG13O75143 517 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 CYP4B1P13584 511 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 AKR1A1P14550 325 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 HOXB2P14652 356 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 TNFRSF8P28908 595 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 PGM1P36871 562 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 PTPN9P43378 593 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 VAMP2P63027 116 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 BYSLQ13895 437 aaKnown RBP4.22□□□□□ -1.73
LINC00353-201ENST00000435401 SIM2Q14190 667 aaPredicted RBP4.22□□□□□ -1.73
LINC00353-201ENST00000435401 NFIL3Q16649 462 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 FBXO43Q4G163 708 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 ZNF628Q5EBL2 1059 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 LIPMQ5VYY2 423 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 CAPRIN2Q6IMN6 1127 aaKnown RBP4.22□□□□□ -1.73
LINC00353-201ENST00000435401 USP43Q70EL4 1123 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 MAATS1Q7Z4T9 603 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.22□□□□□ -1.73
LINC00353-201ENST00000435401 BRSK2Q8IWQ3 736 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 FBXL14Q8N1E6 418 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 TMEM217Q8N7C4 229 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 LSM14AQ8ND56 463 aaKnown RBP4.22□□□□□ -1.73
LINC00353-201ENST00000435401 RUFY2Q8WXA3 655 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 KAT2AQ92830 837 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 KAT2BQ92831 832 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 RNF125Q96EQ8 232 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 LBHD1Q9BQE6 289 aaPredicted RBP4.22□□□□□ -1.73
LINC00353-201ENST00000435401 TAOK3Q9H2K8 898 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 THSD1Q9NS62 852 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 TMEM248Q9NWD8 314 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 IPO11Q9UI26 975 aaKnown RBP4.22□□□□□ -1.73
LINC00353-201ENST00000435401 CD207Q9UJ71 328 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 PCDHA7Q9UN72 937 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 DTX4Q9Y2E6 619 aa4.22□□□□□ -1.73
LINC00353-201ENST00000435401 A0A0G2JK05 382 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 KIR2DS5A0A0G2JLQ3 304 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 SH2D7A6NKC9 451 aaPredicted RBP4.21□□□□□ -1.74
LINC00353-201ENST00000435401 KIR2DS3K7RE56 304 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 ACOT8O14734 319 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 MBD4O95243 580 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 HOXB9P17482 250 aaPredicted RBP4.21□□□□□ -1.74
LINC00353-201ENST00000435401 PRKCHP24723 683 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 GSTM2P28161 218 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 ABCD3P28288 659 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 HNF1BP35680 557 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 MLH1P40692 756 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 RPS6KA3P51812 740 aa4.21□□□□□ -1.74
LINC00353-201ENST00000435401 DDX10Q13206 875 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms