RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 SLCO6A1Q86UG4 719 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 DRC7Q8IY82 874 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 SETD7Q8WTS6 366 aaKnown RBP16.1■□□□□ 0.17
NUP50-210ENST00000434760 FAM172AQ8WUF8 416 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 SERAC1Q96JX3 654 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 OSBPL2Q9H1P3 480 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 TNKS2Q9H2K2 1166 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 PREBQ9HCU5 417 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 TMEM248Q9NWD8 314 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 OR12D3Q9UGF7 316 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 ACTL7AQ9Y615 435 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 WASF2Q9Y6W5 498 aa16.1■□□□□ 0.17
NUP50-210ENST00000434760 GOLGA4Q13439 2230 aaKnown RBP16.09■□□□□ 0.17
NUP50-210ENST00000434760 CBX4O00257 560 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 CCP110O43303 1012 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 BNIP3LO60238 219 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 CALB1P05937 261 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 KRT3P12035 628 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 ACVRL1P37023 503 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 GRK6P43250 576 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 MAPKAPK2P49137 400 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 C21orf59P57076 290 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 NXPH1P58417 271 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
NUP50-210ENST00000434760 DPY19L3Q6ZPD9 716 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 PNPLA1Q8N8W4 532 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 TMIEQ8NEW7 156 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 GRIN3AQ8TCU5 1115 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 PCMTD1Q96MG8 357 aaPredicted RBP16.09■□□□□ 0.17
NUP50-210ENST00000434760 ELF4Q99607 663 aaPredicted RBP16.09■□□□□ 0.17
NUP50-210ENST00000434760 AGPAT1Q99943 283 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 FUCA2Q9BTY2 467 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 CEP44Q9C0F1 390 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 ATP13A1Q9HD20 1204 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 AASDHPPTQ9NRN7 309 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 DMTF1Q9Y222 760 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 PCDHB9Q9Y5E1 797 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 ACACAQ13085 2346 aa16.09■□□□□ 0.17
NUP50-210ENST00000434760 TDRD6O60522 2096 aaKnown RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3DA0A087WVF3 549 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3IA0A087WXS9 549 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3EA0A087X179 549 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3KA0A087X1G2 549 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 CXorf51AA0A1B0GTR3 108 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 TMEM8BA6NDV4 472 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3FA6NER0 549 aaPredicted RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3LB9A6J9 549 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 ATXN1LP0C7T5 689 aaKnown RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3HP0C7X1 549 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 RHOQP17081 205 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 GPD1P21695 349 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 EPHA8P29322 1005 aaPredicted RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 MAT2AP31153 395 aaKnown RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3GQ6DHY5 549 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3CQ6IPX1 549 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 WDR59Q6PJI9 974 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 KANSL1Q7Z3B3 1105 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 SPATS2Q86XZ4 545 aaKnown RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D3Q8IZP1 549 aaPredicted RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 PCDH20Q8N6Y1 951 aaKnown RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 TMEM145Q8NBT3 493 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 TBC1D31Q96DN5 1066 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 CCDC114Q96M63 670 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 SELENOOQ9BVL4 669 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
NUP50-210ENST00000434760 TAS2R14Q9NYV8 317 aa16.08■□□□□ 0.16
NUP50-210ENST00000434760 SIGLEC16A6NMB1 481 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 KPNA3O00505 521 aaPredicted RBP16.07■□□□□ 0.16
NUP50-210ENST00000434760 DFNA5O60443 496 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 LEFTY1O75610 366 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 PRNPP04156 253 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 CAPNS1P04632 268 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 FERP16591 822 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 NUDT1P36639 197 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 ZNF143P52747 638 aaPredicted RBP16.07■□□□□ 0.16
NUP50-210ENST00000434760 RPL7AP62424 266 aaKnown RBP16.07■□□□□ 0.16
NUP50-210ENST00000434760 OGDHQ02218 1023 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 ARL13BQ3SXY8 428 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 PRAMEF14Q5SWL7 426 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 SFMBT2Q5VUG0 894 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 RETSATQ6NUM9 610 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 IRF2BP2Q7Z5L9 587 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 MFSD2AQ8NA29 543 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 SAP25Q8TEE9 199 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 ARHGEF2Q92974 986 aaKnown RBP16.07■□□□□ 0.16
NUP50-210ENST00000434760 MCEEQ96PE7 176 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 CDC6Q99741 560 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 SPON2Q9BUD6 331 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 HDAC8Q9BY41 377 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 TTYH3Q9C0H2 523 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 RETREG1Q9H6L5 497 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 NOL6Q9H6R4 1146 aaKnown RBP16.07■□□□□ 0.16
NUP50-210ENST00000434760 GDF3Q9NR23 364 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 IL36AQ9UHA7 158 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 ZMIZ1Q9ULJ6 1067 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 MYO6Q9UM54 1294 aa16.07■□□□□ 0.16
NUP50-210ENST00000434760 APOBEC2Q9Y235 224 aaKnown RBP16.07■□□□□ 0.16
NUP50-210ENST00000434760 FCF1Q9Y324 198 aaKnown RBP16.07■□□□□ 0.16
NUP50-210ENST00000434760 MYLKQ15746 1914 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms