RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 DRAP1Q14919 205 aaPredicted RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DLG2Q15700 870 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TPD52L1Q16890 204 aaPredicted RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SLC25A52Q3SY17 297 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ALFQ53S48 1182 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PRAMEF14Q5SWL7 426 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ACBD5Q5T8D3 534 aaPredicted RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 KLHDC7AQ5VTJ3 777 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FAM46CQ5VWP2 391 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3GQ6DHY5 549 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3CQ6IPX1 549 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 LRSAM1Q6UWE0 723 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 BNIPLQ7Z465 357 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TRIM46Q7Z4K8 759 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 IQCHQ86VS3 1027 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TRIM69Q86WT6 500 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 XYLT1Q86Y38 959 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GATAD2AQ86YP4 633 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TBC1D3Q8IZP1 549 aaPredicted RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GALNT15Q8N3T1 639 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 MFSD2AQ8NA29 543 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PIP4K2CQ8TBX8 421 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C1orf74Q96LT6 269 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PSMB7Q99436 277 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 C2orf49Q9BVC5 232 aaPredicted RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TKTL2Q9H0I9 626 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 SIK2Q9H0K1 926 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CCDC86Q9H6F5 360 aaKnown RBP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 WDCPQ9H6R7 721 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ERVMER34-1Q9H9K5 563 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GDF3Q9NR23 364 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 TMEM51Q9NW97 253 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 CHMP5Q9NZZ3 219 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 ZNF212Q9UDV6 495 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 FTSJ1Q9UET6 329 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 VPS51Q9UID3 782 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 DMTF1Q9Y222 760 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 GPSM3Q9Y4H4 160 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 PAXBP1Q9Y5B6 917 aa9.65□□□□□ -0.86
CDC42-IT1-201ENST00000431803 A0A0D9SEW6 157 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 C1QTNF3-AMACRE9PGA6 284 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 F8VZ95 297 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SNAP91O60641 907 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 MT-CO1P00395 513 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 F9P00740 461 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 CTSLP07711 333 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 RHOCP08134 193 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SRCP12931 536 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 UCHL3P15374 230 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 FLT3P36888 993 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 RXRGP48443 463 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 ARRB1P49407 418 aaPredicted RBP9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 TAS2R38P59533 333 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 OVGP1Q12889 678 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 RAPGEF1Q13905 1077 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 ACCSLQ4AC99 568 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 HSP90AA4PQ58FG1 418 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SLC45A4Q5BKX6 768 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 FAM102AQ5T9C2 384 aaPredicted RBP9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 PIP5KL1Q5T9C9 394 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SFMBT2Q5VUG0 894 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 TRNP1Q6NT89 227 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 ARCQ7LC44 396 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 KANSL1Q7Z3B3 1105 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SETD3Q86TU7 594 aaPredicted RBP9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 NOP9Q86U38 636 aaKnown RBP9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SPATS2Q86XZ4 545 aaKnown RBP9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 OXR1Q8N573 874 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 DCAF4L2Q8NA75 395 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 OR2A12Q8NGT7 310 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 MDM1Q8TC05 714 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 C18orf8Q96DM3 657 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 TBCBQ99426 244 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 MUC3BQ9H195 1237 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 PREBQ9HCU5 417 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 TMPRSS4Q9NRS4 437 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SAMSN1Q9NSI8 373 aaKnown RBP9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 TMEM59LQ9UK28 342 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 MAP4K5Q9Y4K4 846 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 PCDHGA1Q9Y5H4 931 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SNX10Q9Y5X0 201 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 BPTFQ12830 3046 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 KALRNO60229 2985 aa9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 GOLGA4Q13439 2230 aaKnown RBP9.64□□□□□ -0.87
CDC42-IT1-201ENST00000431803 E9PAM4 449 aa9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 K7ERQ8 282 aa9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 ENC1O14682 589 aa9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SMAD6O43541 496 aaKnown RBP9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 ZIC2O95409 532 aaPredicted RBP9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 ITGAVP06756 1048 aa9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 EEF1GP26641 437 aaKnown RBP9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 MAT2AP31153 395 aaKnown RBP9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 RNASE9P60153 205 aaKnown RBP9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 NOMO3P69849 1222 aa9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 KRT83P78385 493 aa9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 DEUP1Q05D60 604 aa9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 POM121L1PQ3SYA9 428 aa9.63□□□□□ -0.87
CDC42-IT1-201ENST00000431803 SETMARQ53H47 684 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms