RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 C1orf74Q96LT6 269 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 SYT11Q9BT88 431 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 C2orf49Q9BVC5 232 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-202ENST00000430200 KLC2Q9H0B6 622 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 NOL6Q9H6R4 1146 aaKnown RBP12.05□□□□□ -0.48
HDAC4-202ENST00000430200 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 GGT7Q9UJ14 662 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 FCF1Q9Y324 198 aaKnown RBP12.05□□□□□ -0.48
HDAC4-202ENST00000430200 MGAQ8IWI9 3026 aa12.05□□□□□ -0.48
HDAC4-202ENST00000430200 KALRNO60229 2985 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3DA0A087WVF3 549 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3IA0A087WXS9 549 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3EA0A087X179 549 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3KA0A087X1G2 549 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TMEM8BA6NDV4 472 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3FA6NER0 549 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3LB9A6J9 549 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 SLC7A4O43246 635 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 CCP110O43303 1012 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 RNGTTO60942 597 aaKnown RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 SDC3O75056 442 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3HP0C7X1 549 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 OR1E1P30953 314 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 RFC1P35251 1148 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 NNMTP40261 264 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 OXCT1P55809 520 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 GSCP56915 257 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 C21orf59P57076 290 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 MYL5Q02045 173 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 OGDHQ02218 1023 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 GNA12Q03113 381 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 CLEC16AQ2KHT3 1053 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 ZNF284Q2VY69 593 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 CCDC157Q569K6 752 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 CT47A1Q5JQC4 288 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3GQ6DHY5 549 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3CQ6IPX1 549 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 DHRS13Q6UX07 377 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 GCNT7Q6ZNI0 430 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 PARS2Q7L3T8 475 aaKnown RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 ARCQ7LC44 396 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TMPRSS7Q7RTY8 843 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 PROSER1Q86XN7 944 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 ZNF677Q86XU0 584 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TBC1D3Q8IZP1 549 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 AOPEPQ8N6M6 819 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 CENPIQ92674 756 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 HAPLN3Q96S86 360 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TM6SF2Q9BZW4 377 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 ZYG11BQ9C0D3 744 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 TAS2R14Q9NYV8 317 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 APOBEC2Q9Y235 224 aaKnown RBP12.04□□□□□ -0.48
HDAC4-202ENST00000430200 ITM2BQ9Y287 266 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 KIF26BQ2KJY2 2108 aa12.04□□□□□ -0.48
HDAC4-202ENST00000430200 ASXL3Q9C0F0 2248 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ILVBLA1L0T0 632 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 C1QTNF3-AMACRE9PGA6 284 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 TLR4O00206 839 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 RAD51BO15315 384 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 TEX33O43247 280 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-202ENST00000430200 LEFTY1O75610 366 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 LRIG2O94898 1065 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 F9P00740 461 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ADRA1BP35368 520 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ANP32AP39687 249 aaKnown RBP12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ABL2P42684 1182 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 PTPN9P43378 593 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ACADVLP49748 655 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 CCNHP51946 323 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-202ENST00000430200 CLDN2P57739 230 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 SNX16P57768 344 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 RPL7AP62424 266 aaKnown RBP12.03□□□□□ -0.48
HDAC4-202ENST00000430200 STX1AQ16623 288 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ARSIQ5FYB1 569 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 LRRC73Q5JTD7 316 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 PPP1R15BQ5SWA1 713 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 TPRG1LQ5T0D9 272 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 C6orf118Q5T5N4 469 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 DSG4Q86SJ6 1040 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 OR13H1Q8NG92 308 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 FAM172AQ8WUF8 416 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ERGIC2Q96RQ1 377 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 SPON2Q9BUD6 331 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 ATP13A1Q9HD20 1204 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 GDF3Q9NR23 364 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 FTSJ1Q9UET6 329 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 DNAI1Q9UI46 699 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 RP1P56715 2156 aa12.03□□□□□ -0.48
HDAC4-202ENST00000430200 SLC31A1O15431 190 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 TNFSF14O43557 240 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 GIMD1P0DJR0 217 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 SDC4P31431 198 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 CLCN6P51797 869 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 KRT83P78385 493 aa12.02□□□□□ -0.49
HDAC4-202ENST00000430200 NRG1Q02297 640 aaPredicted RBP12.02□□□□□ -0.49
HDAC4-202ENST00000430200 MTA1Q13330 715 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms