RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 DENND5AQ6IQ26 1287 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 DENND1CQ8IV53 801 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 C10orf107Q8IVU9 208 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 FAM136AQ96C01 138 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 MRGPRX2Q96LB1 330 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 LRRC37BQ96QE4 947 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 SPON2Q9BUD6 331 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 FSD1LQ9BXM9 530 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 KCNK13Q9HB14 408 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 SSU72Q9NP77 194 aaKnown RBP10.29□□□□□ -0.76
RPE-206ENST00000429921 PRDM5Q9NQX1 630 aaPredicted RBP10.29□□□□□ -0.76
RPE-206ENST00000429921 TRHDEQ9UKU6 1024 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 ARHGEF37A1IGU5 675 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 GABRB3P28472 473 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 OR1E1P30953 314 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 ERFP50548 548 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 RPS24P62847 133 aaKnown RBP10.29□□□□□ -0.76
RPE-206ENST00000429921 BNIP1Q12981 228 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 GPR17Q13304 367 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 PLD1Q13393 1074 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 HSF5Q4G112 596 aaPredicted RBP10.29□□□□□ -0.76
RPE-206ENST00000429921 ZNF789Q5FWF6 425 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 SPANXN3Q5MJ09 141 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 FYB2Q5VWT5 728 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 SLC41A1Q8IVJ1 513 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 PGBD5Q8N414 524 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 OR7D4Q8NG98 312 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 KLHL29Q96CT2 875 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 ZYG11BQ9C0D3 744 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 ACTR5Q9H9F9 607 aaPredicted RBP10.29□□□□□ -0.76
RPE-206ENST00000429921 CYP4F11Q9HBI6 524 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 TLR8Q9NR97 1041 aaKnown RBP10.29□□□□□ -0.76
RPE-206ENST00000429921 USH1CQ9Y6N9 552 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 UNC80Q8N2C7 3258 aa10.29□□□□□ -0.76
RPE-206ENST00000429921 PATJQ8NI35 1801 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 ATXN2Q99700 1313 aaKnown RBP10.28□□□□□ -0.76
RPE-206ENST00000429921 C2orf78A6NCI8 922 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 MUSKO15146 869 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 GSRP00390 522 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 BMP1P13497 986 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 ARRB2P32121 409 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 ARFIP2P53365 341 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 WNT3AP56704 352 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 COG7P83436 770 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 ZBTB16Q05516 673 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 CDH17Q12864 832 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 RNF43Q68DV7 783 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 CYB5D1Q6P9G0 228 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 SLC39A5Q6ZMH5 540 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 RAPH1Q70E73 1250 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 TMEM135Q86UB9 458 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 ZNF683Q8IZ20 524 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 CNPY4Q8N129 248 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 SGF29Q96ES7 293 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 FUBP3Q96I24 572 aaKnown RBP eCLIP10.28□□□□□ -0.76
RPE-206ENST00000429921 NDNQ99608 321 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 IL12RB2Q99665 862 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 EBF4Q9BQW3 602 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 SUDS3Q9H7L9 328 aaPredicted RBP10.28□□□□□ -0.76
RPE-206ENST00000429921 SP110Q9HB58 689 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 KLC4Q9NSK0 619 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 BAIAP2L1Q9UHR4 511 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 ZFP69BQ9UJL9 534 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 FNDC3AQ9Y2H6 1198 aaKnown RBP10.28□□□□□ -0.76
RPE-206ENST00000429921 CHD7Q9P2D1 2997 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 PEX11BO96011 259 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 AHSGP02765 367 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 BPGMP07738 259 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 T-ENOLP0DO92 83 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 CRHR1P34998 444 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 MAP2K2P36507 400 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 GP5P40197 560 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 CCNFP41002 786 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 ELF3P78545 371 aaPredicted RBP10.28□□□□□ -0.76
RPE-206ENST00000429921 VWA5B1Q5TIE3 1220 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 IL31Q6EBC2 164 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 MFSD6LQ8IWD5 586 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 CRIPAKQ8N1N5 446 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 SCML4Q8N228 414 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 VWCEQ96DN2 955 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 TRIM55Q9BYV6 548 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 RNF38Q9H0F5 515 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 PNPOQ9NVS9 261 aa10.28□□□□□ -0.76
RPE-206ENST00000429921 GREB1Q4ZG55 1949 aa10.27□□□□□ -0.76
RPE-206ENST00000429921 RANBP2P49792 3224 aaKnown RBP10.27□□□□□ -0.76
RPE-206ENST00000429921 OR6C75A6NL08 312 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 FGF10O15520 208 aaPredicted RBP10.27□□□□□ -0.77
RPE-206ENST00000429921 GSTA2P09210 222 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 PRSS56P0CW18 603 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 TROVE2P10155 538 aaKnown RBP eCLIP10.27□□□□□ -0.77
RPE-206ENST00000429921 SERPINB9P50453 376 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 AQP5P55064 265 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 MPP3Q13368 585 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 ITGA9Q13797 1035 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 GALNT3Q14435 633 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 SETDB1Q15047 1291 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 POLD3Q15054 466 aaPredicted RBP10.27□□□□□ -0.77
RPE-206ENST00000429921 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
RPE-206ENST00000429921 NAPEPLDQ6IQ20 393 aa10.27□□□□□ -0.77
RPE-206ENST00000429921 RGS9BPQ6ZS82 235 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms