RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PCDH20Q8N6Y1 951 aaKnown RBP15.22■□□□□ 0.03
MSH5-208ENST00000429846 ARRDC3Q96B67 414 aa15.22■□□□□ 0.03
MSH5-208ENST00000429846 IFT43Q96FT9 208 aa15.22■□□□□ 0.03
MSH5-208ENST00000429846 NAA15Q9BXJ9 866 aaKnown RBP15.22■□□□□ 0.03
MSH5-208ENST00000429846 ZYG11BQ9C0D3 744 aa15.22■□□□□ 0.03
MSH5-208ENST00000429846 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
MSH5-208ENST00000429846 RETREG1Q9H6L5 497 aa15.22■□□□□ 0.03
MSH5-208ENST00000429846 KLHL11Q9NVR0 708 aa15.22■□□□□ 0.03
MSH5-208ENST00000429846 MPP6Q9NZW5 540 aa15.22■□□□□ 0.03
MSH5-208ENST00000429846 PPARGC1AQ9UBK2 798 aaKnown RBP15.22■□□□□ 0.03
MSH5-208ENST00000429846 ZNF212Q9UDV6 495 aa15.22■□□□□ 0.03
MSH5-208ENST00000429846 F8VZ95 297 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 SMAD6O43541 496 aaKnown RBP15.21■□□□□ 0.03
MSH5-208ENST00000429846 SDC3O75056 442 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 UCHL3P15374 230 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 ETFBP38117 255 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 E2F1Q01094 437 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 KCNMA1Q12791 1236 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 TARDBPQ13148 414 aaKnown RBP eCLIP15.21■□□□□ 0.03
MSH5-208ENST00000429846 DPCR1Q3MIW9 517 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 TMEM259Q4ZIN3 620 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 SOWAHCQ53LP3 525 aaPredicted RBP15.21■□□□□ 0.03
MSH5-208ENST00000429846 CT47A1Q5JQC4 288 aaPredicted RBP15.21■□□□□ 0.03
MSH5-208ENST00000429846 KIAA1161Q6NSJ0 714 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 LINGO4Q6UY18 593 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 DPY19L3Q6ZPD9 716 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 ZNF677Q86XU0 584 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 DCP2Q8IU60 420 aaKnown RBP15.21■□□□□ 0.03
MSH5-208ENST00000429846 OR4C6Q8NH72 309 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 GRIN3AQ8TCU5 1115 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 EPS8L1Q8TE68 723 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 LRIG1Q96JA1 1093 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 STK33Q9BYT3 514 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 ATP13A1Q9HD20 1204 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 TMEM59LQ9UK28 342 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 CA5BQ9Y2D0 317 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 AK5Q9Y6K8 562 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 CELSR3Q9NYQ7 3312 aa15.21■□□□□ 0.03
MSH5-208ENST00000429846 TDRD6O60522 2096 aaKnown RBP15.2■□□□□ 0.02
MSH5-208ENST00000429846 A6NNZ2 444 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 PES1O00541 588 aaKnown RBP15.2■□□□□ 0.02
MSH5-208ENST00000429846 SIGLEC6O43699 453 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 SRGAP2O75044 1071 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 LEFTY1O75610 366 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 PCDH8O95206 1070 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 ALPPL2P10696 532 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 PRLRP16471 622 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 DGKAP23743 735 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 ITGB7P26010 798 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 EEF1GP26641 437 aaKnown RBP15.2■□□□□ 0.02
MSH5-208ENST00000429846 NOMO3P69849 1222 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 DAB2P98082 770 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 NRG1Q02297 640 aaPredicted RBP15.2■□□□□ 0.02
MSH5-208ENST00000429846 GNA12Q03113 381 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 TAF3Q5VWG9 929 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 ABI3BPQ7Z7G0 1075 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 NOP9Q86U38 636 aaKnown RBP15.2■□□□□ 0.02
MSH5-208ENST00000429846 FAM131BQ86XD5 332 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 SLC25A45Q8N413 288 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 CHST14Q8NCH0 376 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 OR7D4Q8NG98 312 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 CFAP57Q96MR6 1250 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 MYOCQ99972 504 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 HEPHQ9BQS7 1158 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 CALN1Q9BXU9 219 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 TNKS2Q9H2K2 1166 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 TMPRSS4Q9NRS4 437 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 ZFR2Q9UPR6 939 aaKnown RBP15.2■□□□□ 0.02
MSH5-208ENST00000429846 CLCA2Q9UQC9 943 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 SNX10Q9Y5X0 201 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 WASF2Q9Y6W5 498 aa15.2■□□□□ 0.02
MSH5-208ENST00000429846 NEMP2A6NFY4 417 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 GOLGA8SH3BPF8 625 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 TRIM38O00635 465 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 AP1G1O43747 822 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 ZMPSTE24O75844 475 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 PIAS2O75928 621 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 ENDOD1O94919 500 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 ADRB3P13945 408 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 GLDCP23378 1020 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 CLDN6P56747 220 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 GEMIN4P57678 1058 aaKnown RBP15.19■□□□□ 0.02
MSH5-208ENST00000429846 RPS21P63220 83 aaKnown RBP15.19■□□□□ 0.02
MSH5-208ENST00000429846 ARL13BQ3SXY8 428 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 ARSIQ5FYB1 569 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 ARTNQ5T4W7 220 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 TRNP1Q6NT89 227 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 KYAT3Q6YP21 454 aaKnown RBP15.19■□□□□ 0.02
MSH5-208ENST00000429846 GCNT7Q6ZNI0 430 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 LRRC69Q6ZNQ3 347 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 PLPP6Q8IY26 295 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 DCBLD1Q8N8Z6 715 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 OR13H1Q8NG92 308 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 SNIP1Q8TAD8 396 aaKnown RBP15.19■□□□□ 0.02
MSH5-208ENST00000429846 BAP1Q92560 729 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 ISG20Q96AZ6 181 aaKnown RBP15.19■□□□□ 0.02
MSH5-208ENST00000429846 DCBLD2Q96PD2 775 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 SPON2Q9BUD6 331 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 USP29Q9HBJ7 922 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 FZD3Q9NPG1 666 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms