RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 CDK5RAP1Q96SZ6 601 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 LBHD1Q9BQE6 289 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 WDR83Q9BRX9 315 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 TRIM56Q9BRZ2 755 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 MRPL1Q9BYD6 325 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 SHCBP1LQ9BZQ2 653 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 UPF3AQ9H1J1 476 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 EFCAB1Q9HAE3 211 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 CHRAC1Q9NRG0 131 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 TMPRSS4Q9NRS4 437 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 PNPOQ9NVS9 261 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 FNIP2Q9P278 1114 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 FBXO5Q9UKT4 447 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 PCDHB7Q9Y5E2 793 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 DOCK5Q9H7D0 1870 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 ZNF646O15015 1829 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 A0A0U1RQF3 1178 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 KIF1CO43896 1103 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 ZNF623O75123 536 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 GMNNO75496 209 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 TRPA1O75762 1119 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 S100BP04271 92 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 ASGR1P07306 291 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 TPBGLP0DKB5 382 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 ATP6V1C1P21283 382 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 ATP5F1P24539 256 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 CA8P35219 290 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 RPL34P49207 117 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 SLC11A2P49281 568 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 HARS2P49590 506 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 FLT3LGP49771 235 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 NAGLUP54802 743 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 WNT3AP56704 352 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 POU4F1Q01851 419 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 TBL3Q12788 808 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 STX5Q13190 355 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 PDAP1Q13442 181 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 UBAP2LQ14157 1087 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 CSHL1Q14406 222 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 PDCD2Q16342 344 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 FAM182AQ5T1J6 154 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 GDF6Q6KF10 455 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 BNC2Q6ZN30 1099 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 RINLQ6ZS11 566 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 KIAA0408Q6ZU52 694 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 OTOP3Q7RTS5 596 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 TFAP2DQ7Z6R9 452 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 IFNL1Q8IU54 200 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 TNS4Q8IZW8 715 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 RTL3Q8N8U3 475 aaKnown RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 TTC16Q8NEE8 873 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 PIP4K2CQ8TBX8 421 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 RMDN1Q96DB5 314 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 SUSD3Q96L08 255 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 C11orf84Q9BUA3 381 aaPredicted RBP5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 GPAMQ9HCL2 828 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 ADA2Q9NZK5 511 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 MARCH2Q9P0N8 246 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 CACNG4Q9UBN1 327 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 SFMBT1Q9UHJ3 866 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 SNX10Q9Y5X0 201 aa5.48□□□□□ -1.53
ATP13A3-202ENST00000429136 UBA6A0AVT1 1052 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 OR6C75A6NL08 312 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 MEI4A8MW99 385 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 E9PAM4 449 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 RHOQP17081 205 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 DNAJB1P25685 340 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 PRDX6P30041 224 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 SERPINB5P36952 375 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 ETFBP38117 255 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 GRIA4P48058 902 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 RABGGTBP53611 331 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 DSG1Q02413 1049 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 MSLNQ13421 630 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 GRM3Q14832 879 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 VEPH1Q14D04 833 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 KIF19Q2TAC6 998 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 TEDDM1Q5T9Z0 273 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 FAM91A1Q658Y4 838 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 MBLAC2Q68D91 279 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 IL31Q6EBC2 164 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 IRGCQ6NXR0 463 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 AAGABQ6PD74 315 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 ZYG11AQ6WRX3 759 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 RIPOR1Q6ZS17 1223 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 BEND5Q7L4P6 421 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 SERINC5Q86VE9 423 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 SLC41A1Q8IVJ1 513 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 KYQ8NBH2 561 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 ICA1LQ8NDH6 482 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 KCTD4Q8WVF5 259 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 SPDL1Q96EA4 605 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 FUBP3Q96I24 572 aaKnown RBP eCLIP5.47□□□□□ -1.537e-7■■■□□ 18.3
ATP13A3-202ENST00000429136 ZNF512Q96ME7 567 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 TSGA13Q96PP4 275 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 MRPL57Q9BQC6 102 aaKnown RBP5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 FTHL17Q9BXU8 183 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 TRIM15Q9C019 465 aa5.47□□□□□ -1.53
ATP13A3-202ENST00000429136 CAB39LQ9H9S4 337 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms