RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 MAGED4Q96JG8 741 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 IDI2Q9BXS1 227 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 DDX4Q9NQI0 724 aaKnown RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 NECTIN3Q9NQS3 549 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PRR14LQ5THK1 2151 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 CNTNAP4Q9C0A0 1308 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 GOLGA8QA0A0J9YX86 632 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 GOLGA8OA6NCC3 632 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MEI4A8MW99 385 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 GOLGA8NF8WBI6 632 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 BCL10O95999 233 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 HADHAP40939 763 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 ARL13AQ5H913 290 aaPredicted RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 SIGIRRQ6IA17 410 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 SLC30A10Q6XR72 485 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 RSAD2Q8WXG1 361 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 TAMM41Q96BW9 452 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 CSF3RQ99062 836 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 CNPY3Q9BT09 278 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 SLIRPQ9GZT3 109 aaKnown RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 MOV10Q9HCE1 1003 aaKnown RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 EIF2B3Q9NR50 452 aaKnown RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 HOXD11P31277 338 aaPredicted RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 BTDP43251 543 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PPP5CP53041 499 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 ATP1A4Q13733 1029 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 SNX17Q15036 470 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 KAZNQ674X7 775 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 ZNF773Q6PK81 442 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 KCTD1Q719H9 257 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MFSD4AQ8N468 514 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 HIPK4Q8NE63 616 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 ANGPTL6Q8NI99 470 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 ATL1Q8WXF7 558 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 NANOGQ9H9S0 305 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 VTI1BQ9UEU0 232 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 EIF3FO00303 357 aaPredicted RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 C2P06681 752 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 GPIP06744 558 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PIK3R1P27986 724 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 EIF2B2P49770 351 aaKnown RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 NUDT2P50583 147 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 BNIP3Q12983 259 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 SEL1L3Q68CR1 1132 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PTF1AQ7RTS3 328 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MCF2L2Q86YR7 1114 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 LRRC49Q8IUZ0 686 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 SFRP1Q8N474 314 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 OR6F1Q8NGZ6 308 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 HMGCLL1Q8TB92 370 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 DPF3Q92784 378 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 AKT1S1Q96B36 256 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 ACE2Q9BYF1 805 aaPredicted RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 KIAA1549LQ6ZVL6 1849 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 DGKIO75912 1065 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 SERPINB5P36952 375 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 GP5P40197 560 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PLA2G16P53816 162 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 ADARB1P78563 741 aaKnown RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 GRIK2Q13002 908 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PRKAA1Q13131 559 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 HSDL1Q3SXM5 330 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 NAPRTQ6XQN6 538 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 BRINP3Q76B58 766 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 CDR2LQ86X02 465 aaPredicted RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 MCPH1Q8NEM0 835 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 AFG1LQ8WV93 481 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MMP19Q99542 508 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 DNAI2Q9GZS0 605 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 GINM1Q9NU53 330 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PRR12Q9ULL5 1215 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 USP18Q9UMW8 372 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 GVINP1Q7Z2Y8 2422 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 NOTCH4Q99466 2003 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 CCDC78A2IDD5 438 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 KLRG2A4D1S0 409 aaPredicted RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 J3QRK9 145 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 K7ENM7 598 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PLOD2O00469 737 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MDM4O15151 490 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 H2AFYO75367 372 aaKnown RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 HLA-DRAP01903 254 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MIPP30301 263 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 RFC2P35250 354 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MSX2P35548 267 aaPredicted RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 HPCAL1P37235 193 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 GNA12Q03113 381 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 SPP2Q13103 211 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 SLC12A1Q13621 1099 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MFSD4BQ5TF39 518 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 MROH9Q5TGP6 573 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 OLFML1Q6UWY5 402 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 TMEM179Q6ZVK1 233 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 BTLAQ7Z6A9 289 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 C10orf107Q8IVU9 208 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 CTAGE3PQ8IX95 158 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 HACE1Q8IYU2 909 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PJA1Q8NG27 643 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 HCAR2Q8TDS4 363 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 S100ZQ8WXG8 99 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms