RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TBC1D31Q96DN5 1066 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 OSBPL2Q9H1P3 480 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 KDM4CQ9H3R0 1056 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 ARHGAP20Q9P2F6 1191 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 FCF1Q9Y324 198 aaKnown RBP18.8■□□□□ 0.6
PSPC1-202ENST00000427943 NEUROG3Q9Y4Z2 214 aa18.8■□□□□ 0.6
PSPC1-202ENST00000427943 TDRD6O60522 2096 aaKnown RBP18.8■□□□□ 0.6
PSPC1-202ENST00000427943 COL5A1P20908 1838 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 IGF2RP11717 2491 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 A0A1B0GTQ1 180 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 SIGLEC16A6NMB1 481 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 SMTNL1A8MU46 457 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 TRIM16O95361 564 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 PROS1P07225 676 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 PLEKP08567 350 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 RHOQP17081 205 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 RECQLP46063 649 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 RPL7AP62424 266 aaKnown RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 SUZ12Q15022 739 aaKnown RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 RETSATQ6NUM9 610 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 SCYL2Q6P3W7 929 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 DBX2Q6ZNG2 339 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 DPY19L3Q6ZPD9 716 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 RAB44Q7Z6P3 723 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 GLRX5Q86SX6 157 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 PRPF39Q86UA1 669 aaKnown RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 NLRP14Q86W24 1093 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 TRIM69Q86WT6 500 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 PYROXD2Q8N2H3 581 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 GATA6Q92908 595 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 SKA1Q96BD8 255 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 ELF4Q99607 663 aaPredicted RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 DYRK4Q9NR20 520 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 TMEM248Q9NWD8 314 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 TAS2R14Q9NYV8 317 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 IL36AQ9UHA7 158 aa18.79■□□□□ 0.6
PSPC1-202ENST00000427943 TPX2Q9ULW0 747 aaKnown RBP18.79■□□□□ 0.6
PSPC1-202ENST00000427943 LRRC53A6NM62 1247 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 GOLGA8CPA6NN73 597 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 TMCO5BA8MYB1 307 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 RNGTTO60942 597 aaKnown RBP18.78■□□□□ 0.6
PSPC1-202ENST00000427943 ZNF821O75541 412 aaPredicted RBP18.78■□□□□ 0.6
PSPC1-202ENST00000427943 PRNPP04156 253 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 CCDC172P0C7W6 258 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 MAPKAPK2P49137 400 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 ZNF165P49910 485 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 DNA2P51530 1060 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 ARSIQ5FYB1 569 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 ACAD10Q6JQN1 1059 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 LEKR1Q6ZMV7 388 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 IRF2BP2Q7Z5L9 587 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 SLFN11Q7Z7L1 901 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 SLCO6A1Q86UG4 719 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 GATAD2AQ86YP4 633 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 MCOLN2Q8IZK6 566 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 TMIEQ8NEW7 156 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 KLK6Q92876 244 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 ARHGEF2Q92974 986 aaKnown RBP18.78■□□□□ 0.6
PSPC1-202ENST00000427943 NTAN1Q96AB6 310 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 MYOCQ99972 504 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 TM6SF2Q9BZW4 377 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 PREBQ9HCU5 417 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 GDF3Q9NR23 364 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 APOBEC2Q9Y235 224 aaKnown RBP18.78■□□□□ 0.6
PSPC1-202ENST00000427943 CA5BQ9Y2D0 317 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 WASF2Q9Y6W5 498 aa18.78■□□□□ 0.6
PSPC1-202ENST00000427943 ANKRD36A6QL64 1941 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 ANKRD62A6NC57 917 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 ATMINO43313 823 aaPredicted RBP18.77■□□□□ 0.6
PSPC1-202ENST00000427943 PCDHGA12O60330 932 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 LEFTY1O75610 366 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 CD160O95971 181 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 ATXN1LP0C7T5 689 aaKnown RBP18.77■□□□□ 0.6
PSPC1-202ENST00000427943 TNFAIP3P21580 790 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 GRK6P43250 576 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 CCNHP51946 323 aaPredicted RBP18.77■□□□□ 0.6
PSPC1-202ENST00000427943 ZNF143P52747 638 aaPredicted RBP18.77■□□□□ 0.6
PSPC1-202ENST00000427943 NXPH1P58417 271 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 SLC45A4Q5BKX6 768 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 PPP1R15BQ5SWA1 713 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 E4F1Q66K89 784 aaPredicted RBP18.77■□□□□ 0.6
PSPC1-202ENST00000427943 DNAAF5Q86Y56 855 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 PCDH20Q8N6Y1 951 aaKnown RBP18.77■□□□□ 0.6
PSPC1-202ENST00000427943 ADAMTS14Q8WXS8 1223 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 CDC6Q99741 560 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 SYT11Q9BT88 431 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 CEP44Q9C0F1 390 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 TOR4AQ9NXH8 423 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 MSRB2Q9Y3D2 182 aa18.77■□□□□ 0.6
PSPC1-202ENST00000427943 A0A1W2PQU0 124 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 TLR4O00206 839 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 DFNA5O60443 496 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 RAMP2O60895 175 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 PRLRP16471 622 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 ETFBP38117 255 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 OGDHQ02218 1023 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 SLC20A2Q08357 652 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 SCAPQ12770 1279 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 SHBQ15464 509 aa18.76■□□□□ 0.59
PSPC1-202ENST00000427943 ASIC2Q16515 512 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms