RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 SERINC3Q13530 473 aa18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 HNRNPDQ14103 355 aaKnown RBP18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 POLD3Q15054 466 aaPredicted RBP18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 EMC10Q5UCC4 262 aa18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 TRIM67Q6ZTA4 783 aa18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 CHST9Q7L1S5 443 aa18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 MAB21L3Q8N8X9 362 aa18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 FAM76AQ8TAV0 307 aa18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 MLPHQ9BV36 600 aaPredicted RBP18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 ATXN3LQ9H3M9 355 aa18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 ZNF318Q5VUA4 2279 aa18.29■□□□□ 0.52
AC055811.2-201ENST00000427497 A0A1W2PRU2 124 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 C2CD4DB7Z1M9 353 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 GFRA2O00451 464 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 CLDN11O75508 207 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 RFPL2O75678 378 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 MYL4P12829 197 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 PHBP35232 272 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 SLCO1A2P46721 670 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 RPS24P62847 133 aaKnown RBP18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 TNK2Q07912 1038 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 C3orf62Q6ZUJ4 267 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 FAM217AQ8IXS0 508 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 PALM2Q8IXS6 379 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 USP33Q8TEY7 942 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 FAM122AQ96E09 287 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 GCNAQ96QF7 691 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 FCRL5Q96RD9 977 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 GLOD4Q9HC38 313 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 HCFC1R1Q9NWW0 138 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 EURLQ9NYK6 297 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 RABGEF1Q9UJ41 708 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 WDFY4Q6ZS81 3184 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 TRAV19A0A0A6YYK7 116 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 SMIM23A6NLE4 172 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 J3KR12 359 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 RGS16O15492 202 aaPredicted RBP18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 SPAG6O75602 509 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 FGF19O95750 216 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 HNRNPA1P09651 372 aaKnown RBP eCLIP18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 CCR2P41597 374 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 MMP13P45452 471 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 SGSHP51688 502 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 IL10RBQ08334 325 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 TTC39BQ5VTQ0 682 aaPredicted RBP18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 GPR149Q86SP6 731 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 TDRPQ86YL5 185 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 MAGEH1Q9H213 219 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 PPCSQ9HAB8 311 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 PLAC1Q9HBJ0 212 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 RBM22Q9NW64 420 aaKnown RBP eCLIP18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 BCCIPQ9P287 314 aaKnown RBP eCLIP18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 FETUBQ9UGM5 382 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 LGALS13Q9UHV8 139 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 ADAM21Q9UKJ8 722 aa18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 NOVA2Q9UNW9 492 aaKnown RBP18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 HELZP42694 1942 aaKnown RBP18.28■□□□□ 0.52
AC055811.2-201ENST00000427497 MUC6Q6W4X9 2439 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 A0A1B0GVM2 712 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 TCAF2A6NFQ2 919 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 TMEM221A6NGB7 291 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 M0R296 226 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 TRDMT1O14717 391 aaKnown RBP18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 PSMD3O43242 534 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 AGTP01019 485 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 HLA-DQB2P05538 268 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 PTPN2P17706 415 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 GCAP28676 217 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 RENBPP51606 427 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 PRPSAP1Q14558 356 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 CAPN12Q6ZSI9 719 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 OTOP3Q7RTS5 596 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 TEX26Q8N6G2 289 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 SHKBP1Q8TBC3 707 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 ARHGEF2Q92974 986 aaKnown RBP18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 OXNAD1Q96HP4 312 aaPredicted RBP18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 EBNA1BP2Q99848 306 aaKnown RBP18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 SLC46A2Q9BY10 475 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 ACSS3Q9H6R3 686 aa18.27■□□□□ 0.52
AC055811.2-201ENST00000427497 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.51
AC055811.2-201ENST00000427497 EXOC1LA0A1B0GW35 172 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 CDH16O75309 829 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 MOSPD3O75425 235 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 CKMP06732 381 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 POU2F2P09086 479 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 GSTA2P09210 222 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 GJA1P17302 382 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 ACVRL1P37023 503 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 GNA12Q03113 381 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 SIGLEC14Q08ET2 396 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 RASA2Q15283 850 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 STXBP5Q5T5C0 1151 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 HTR3DQ70Z44 454 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 BMP8AQ7Z5Y6 402 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 MPP5Q8N3R9 675 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 RIBC1Q8N443 379 aaPredicted RBP18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 OR52K2Q8NGK3 314 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 FBF1Q8TES7 1133 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 PPP1R2P1Q96PQ5 205 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 STMN4Q9H169 189 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms