RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PXMP2Q9NR77 195 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 CNPY2Q9Y2B0 182 aa6.03□□□□□ -1.44
C9orf3-205ENST00000427193 SRPRBQ9Y5M8 271 aaKnown RBP6.03□□□□□ -1.44
C9orf3-205ENST00000427193 WDR87Q6ZQQ6 2873 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 MYO15AQ9UKN7 3530 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ACACBO00763 2458 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 CCDC194A0A1B0GVG4 234 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 LAD1O00515 517 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 PSMD10O75832 226 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 STAM2O75886 525 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 FESP07332 822 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 CLTBP09497 229 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ALADP13716 330 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ADORA2AP29274 412 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ALDH5A1P51649 535 aaPredicted RBP6.02□□□□□ -1.45
C9orf3-205ENST00000427193 CYP4F2P78329 520 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 PGS1Q32NB8 556 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ARHGAP40Q5TG30 622 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ADALQ6DHV7 355 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 TRIM72Q6ZMU5 477 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 GALNT16Q8N428 558 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ENGASEQ8NFI3 743 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 KCNG4Q8TDN1 519 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 FAM20AQ96MK3 541 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ZNF396Q96N95 335 aaPredicted RBP6.02□□□□□ -1.45
C9orf3-205ENST00000427193 MXRA8Q9BRK3 442 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 PAGR1Q9BTK6 254 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ASPSCR1Q9BZE9 553 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 PRSS22Q9GZN4 317 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 HOMER2Q9NSB8 354 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 CFAP45Q9UL16 551 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 ISY1Q9ULR0 285 aaKnown RBP6.02□□□□□ -1.45
C9orf3-205ENST00000427193 PCDHA7Q9UN72 937 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 HPSEQ9Y251 543 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 PLEKHM1Q9Y4G2 1056 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 CHD6Q8TD26 2715 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 KMT2BQ9UMN6 2715 aaPredicted RBP6.02□□□□□ -1.45
C9orf3-205ENST00000427193 VPS13AQ96RL7 3174 aa6.02□□□□□ -1.45
C9orf3-205ENST00000427193 GVINP1Q7Z2Y8 2422 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 CFAP47Q6ZTR5 3102 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 KBTBD13C9JR72 458 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 PPEF2O14830 753 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 SPTLC2O15270 562 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 MSH4O15457 936 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 EIF3JO75822 258 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 TJP3O95049 919 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 SNAI1O95863 264 aaPredicted RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 TOP3BO95985 862 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 PGK2P07205 417 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 VIPR2P41587 438 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 MMP13P45452 471 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 LILRA4P59901 499 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 NKX6-1P78426 367 aaPredicted RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 SP2Q02086 613 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 ITGB3BPQ13352 177 aaPredicted RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 E2F2Q14209 437 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 PDIA5Q14554 519 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 MFSD14CQ5VZR4 134 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 RESP18Q5W5W9 173 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 SHC4Q6S5L8 630 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 NAPRTQ6XQN6 538 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 CHSY1Q86X52 802 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 PNLDC1Q8NA58 520 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 TRPV1Q8NER1 839 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 RIT2Q99578 217 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 SMAD5Q99717 465 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 NAP1L4Q99733 375 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 SENP7Q9BQF6 1050 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 MMTAG2Q9BU76 263 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 KRTAP1-5Q9BYS1 174 aa6.01□□□□□ -1.45
C9orf3-205ENST00000427193 ADD3Q9UEY8 706 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 NOL7Q9UMY1 257 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 DDX49Q9Y6V7 483 aaKnown RBP6.01□□□□□ -1.45
C9orf3-205ENST00000427193 ANKRD11Q6UB99 2663 aaPredicted RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 MYH7BA7E2Y1 1941 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 A1L4Q6 167 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 H3BUI4 141 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 H7C1Q1 480 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 NEMFO60524 1076 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 CCNT1O60563 726 aaKnown RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 ATP9AO75110 1047 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 UNC5CO95185 931 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 OR52Z1P0C646 297 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 ARP10275 920 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 TGFB3P10600 412 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 CYBAP13498 195 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 SFPQP23246 707 aaKnown RBP eCLIP6□□□□□ -1.45
C9orf3-205ENST00000427193 CMA1P23946 247 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 SOX8P57073 446 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 SETQ01105 290 aaPredicted RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 PPP2R5CQ13362 524 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 PLS1Q14651 629 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 KCTD2Q14681 263 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 LETM2Q2VYF4 491 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 TBC1D25Q3MII6 688 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 CCDC157Q569K6 752 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 HYIQ5T013 277 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 RGS7BPQ6MZT1 257 aaPredicted RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 SLC2A7Q6PXP3 512 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 MTHFD1LQ6UB35 978 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms