RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CISHQ9NSE2 258 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 CCDC167Q9P0B6 97 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 HBS1LQ9Y450 684 aaKnown RBP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 A0A0B4J269 797 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 REM1O75628 298 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 CES1P23141 567 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 TTPAP49638 278 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 CREMQ03060 361 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 TUBB3Q13509 450 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 GNASQ5JWF2 1037 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF304Q9HCX3 659 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 ATP4AP20648 1035 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 PBLDP30039 288 aaPredicted RBP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 SREBF1P36956 1147 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 KLK7P49862 253 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 RIPK1Q13546 671 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 SETMARQ53H47 684 aaPredicted RBP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 PTAR1Q7Z6K3 402 aaPredicted RBP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 DAGLAQ9Y4D2 1042 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 PRAMEF22A3QJZ6 481 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 H3BNH8 94 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 LRIG2O94898 1065 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 SNRPB2P08579 225 aaKnown RBP14.62□□□□□ -0.07
PTPN13-203ENST00000427191 SDC2P34741 201 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 FBXO47Q5MNV8 452 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 EPB41L1Q9H4G0 881 aa14.62□□□□□ -0.07
PTPN13-203ENST00000427191 ANKDD1BA6NHY2 528 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 CBX4O00257 560 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 NR2F6P10588 404 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 HUNKP57058 714 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 ACOT1Q86TX2 421 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 ATG4AQ8WYN0 398 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 LYVE1Q9Y5Y7 322 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 PRODHO43272 600 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 CATP04040 527 aaKnown RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 SCNN1BP51168 640 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 MTTPP55157 894 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 EFEMP1Q12805 493 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 RRP1BQ14684 758 aaKnown RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 DHDDSQ86SQ9 333 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 MEIOBQ8N635 442 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 MRPL57Q9BQC6 102 aaKnown RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 RAB21Q9UL25 225 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 SLC28A1O00337 649 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 WFS1O76024 890 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 GTF2A2P52657 109 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 TBX4P57082 545 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 CBWD6Q4V339 395 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 ANXA8L1Q5VT79 327 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 CELF1Q92879 486 aaKnown RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 MRPL9Q9BYD2 267 aaKnown RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 POMKQ9H5K3 350 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 MCUBQ9NWR8 336 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 EURLQ9NYK6 297 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 UPB1Q9UBR1 384 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 HACL1Q9UJ83 578 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 MPZL2O60487 215 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 ITGB3BPQ13352 177 aaPredicted RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 SNX32Q86XE0 403 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 FBXW8Q8N3Y1 598 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 KBTBD4Q9NVX7 518 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 DNAJA2O60884 412 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 SGPL1O95470 568 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 SERPINA4P29622 427 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 RAB15P59190 212 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 CRY1Q16526 586 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 KATNAL2Q8IYT4 538 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 HELQQ8TDG4 1101 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 PHF21BQ96EK2 531 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 DCDC2CA8MYV0 355 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 UGT2B11O75310 529 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 OR1E1P30953 314 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 ELK3P41970 407 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 ALDH3A2P51648 485 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 USP46P62068 366 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 FAXCQ5TGI0 409 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 RIT1Q92963 219 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 PTGFRNQ9P2B2 879 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 UNC13BO14795 1591 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 GATBO75879 557 aaKnown RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 GCLCP48506 637 aaPredicted RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 POLR1EQ9GZS1 481 aaKnown RBP14.61□□□□□ -0.07
PTPN13-203ENST00000427191 JMJD4Q9H9V9 463 aa14.61□□□□□ -0.07
PTPN13-203ENST00000427191 DLC1Q96QB1 1528 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 AAGABQ6PD74 315 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 ULK3Q6PHR2 472 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 MIB1Q86YT6 1006 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 GPALPP1Q8IXQ4 340 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 ARRDC4Q8NCT1 418 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 LRMDAQ9H2I8 198 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 BTN3A1O00481 513 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 MYBPC3Q14896 1274 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 EPHA10Q5JZY3 1008 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 HYIQ5T013 277 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 BTN2A1Q7KYR7 527 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 SUCOQ9UBS9 1254 aaKnown RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 AXIN2Q9Y2T1 843 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 SLC9A3R1O14745 358 aaPredicted RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 DCXO43602 365 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms