RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 EXOC4Q96A65 974 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 MYO19Q96H55 970 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 RBM41Q96IZ5 413 aaKnown RBP7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 MRGPRX3Q96LB0 322 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 CALN1Q9BXU9 219 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 SLC39A8Q9C0K1 460 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 LMAN1LQ9HAT1 526 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 PRDM16Q9HAZ2 1276 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 C11orf16Q9NQ32 467 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 RBM12Q9NTZ6 932 aaKnown RBP7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 DONSONQ9NYP3 566 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 NDRG2Q9UN36 371 aaKnown RBP7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 ZKSCAN5Q9Y2L8 839 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 MRPS17Q9Y2R5 130 aaKnown RBP7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 JRKLQ9Y4A0 524 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 PCDHGA11Q9Y5H2 935 aa7.23□□□□□ -1.25
CHCHD3P1-201ENST00000425516 CHD5Q8TDI0 1954 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 CHURC1-FNTBB4DL54 471 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 RASA4BC9J798 803 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 RASA4O43374 803 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 KDELR3O43731 214 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 MAFKO60675 156 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 RAMP2O60895 175 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 RHOCP08134 193 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 DLDP09622 509 aaKnown RBP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 KRT10P13645 584 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 AOC1P19801 751 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 GLDCP23378 1020 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 RPS9P46781 194 aaKnown RBP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 CLCN5P51795 746 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 GDF10P55107 478 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 MRPS21P82921 87 aaKnown RBP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 GBE1Q04446 702 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 GRSF1Q12849 480 aaKnown RBP eCLIP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 KLF1Q13351 362 aaPredicted RBP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 SERINC3Q13530 473 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 UBXN2BQ14CS0 331 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 POLD3Q15054 466 aaPredicted RBP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 RPS6KA1Q15418 735 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 PARP15Q460N3 678 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 FBXO43Q4G163 708 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 C4orf17Q53FE4 359 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 TFDP3Q5H9I0 405 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 ZNF569Q5MCW4 686 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 EGFLAMQ63HQ2 1017 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 PKN3Q6P5Z2 889 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 TMCO3Q6UWJ1 677 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 BBS12Q6ZW61 710 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 CCDC117Q8IWD4 279 aaPredicted RBP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 AHI1Q8N157 1196 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 SYNPOQ8N3V7 929 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 KDM1BQ8NB78 822 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 NETO2Q8NC67 525 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 SORCS1Q8WY21 1168 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 HMCESQ96FZ2 354 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 CELF6Q96J87 481 aaKnown RBP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 ALS2CR12Q96Q35 445 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 WDR24Q96S15 920 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 ACOX2Q99424 681 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 OSBPL8Q9BZF1 889 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 TMEM245Q9H330 911 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 GPAMQ9HCL2 828 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 CD248Q9HCU0 757 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 DTLQ9NZJ0 730 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 THAP10Q9P2Z0 257 aaPredicted RBP7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 VPS51Q9UID3 782 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 SIT1Q9Y3P8 196 aa7.22□□□□□ -1.25
CHCHD3P1-201ENST00000425516 MIA3Q5JRA6 1907 aa7.21□□□□□ -1.25
CHCHD3P1-201ENST00000425516 WASH3PC4AMC7 463 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 J3KR12 359 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ENC1O14682 589 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 NPC1O15118 1278 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ATP9BO43861 1147 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 MFSD11O43934 449 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 KIF5CO60282 957 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SNAP91O60641 907 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 CST8O60676 142 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ADAM23O75077 832 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ZNF821O75541 412 aaPredicted RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PEX11BO96011 259 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 MT-CO1P00395 513 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ASLP04424 464 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ATP1A1P05023 1023 aaKnown RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ATP5BP06576 529 aaKnown RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SRPRAP08240 638 aaKnown RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SRCP12931 536 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ZFXP17010 805 aaPredicted RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 POLR2EP19388 210 aaKnown RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SOX11P35716 441 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ETFBP38117 255 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 STK19P49842 368 aaPredicted RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 PAPOLAP51003 745 aaKnown RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ARF5P84085 180 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ECT2LQ008S8 904 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SULT2A1Q06520 285 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 SLC20A2Q08357 652 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 GALNT2Q10471 571 aa7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 ZNF211Q13398 564 aaPredicted RBP7.21□□□□□ -1.26
CHCHD3P1-201ENST00000425516 TFDP2Q14188 446 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms