RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 XKR5Q6UX68 686 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZNF783Q6ZMS7 281 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PARGQ86W56 976 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 RYBPQ8N488 228 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 DCAF4L2Q8NA75 395 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TMEM145Q8NBT3 493 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 OR13H1Q8NG92 308 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 OR2A12Q8NGT7 310 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 NAT6Q93015 286 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ALG14Q96F25 216 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 C1orf74Q96LT6 269 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SLC2A13Q96QE2 648 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CEP44Q9C0F1 390 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TKTL2Q9H0I9 626 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 HEMK1Q9Y5R4 338 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 HS3ST4Q9Y661 456 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ACACAQ13085 2346 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 K7ESM1 405 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TOR1BO14657 336 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 AQP9O43315 295 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TCEA3O75764 348 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 GRAP2O75791 330 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CALCAP01258 141 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CSF2P04141 144 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ANXA6P08133 673 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 L1CAMP32004 1257 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 BLKP51451 505 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 INHBCP55103 352 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 MARSP56192 900 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 RNASE9P60153 205 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 KCNC4Q03721 635 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 EIF4EBP2Q13542 120 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 NR0B2Q15466 257 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TPD52L1Q16890 204 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ISXQ2M1V0 245 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ARL13BQ3SXY8 428 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CARD16Q5EG05 197 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 C3orf38Q5JPI3 329 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PIP5KL1Q5T9C9 394 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CDCP2Q5VXM1 449 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CCDC81Q6ZN84 652 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 RBM44Q6ZP01 1051 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ABI3BPQ7Z7G0 1075 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TRIM59Q8IWR1 403 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PCDH20Q8N6Y1 951 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 WDR36Q8NI36 951 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 KREMEN1Q96MU8 473 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 UCKL1Q9NWZ5 548 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CA5BQ9Y2D0 317 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PCDHB1Q9Y5F3 818 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZFYVE26Q68DK2 2539 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZZEF1O43149 2961 aa12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ANKRD11Q6UB99 2663 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SPTY2D1-AS1A0A0U1RR47 76 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ILVBLA1L0T0 632 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 B8ZZF3 427 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 AP1G1O43747 822 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SRGAP2O75044 1071 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DAB1O75553 588 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 LEFTY1O75610 366 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C6P13671 934 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 JUNDP17535 347 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SULT1E1P49888 294 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 METAP1P53582 386 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CLDN2P57739 230 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TAS2R38P59533 333 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CENPCQ03188 943 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PDE1CQ14123 709 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 BECN1Q14457 450 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TAF5Q15542 800 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 EXOC3L4Q17RC7 722 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C5orf22Q49AR2 442 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TTI2Q6NXR4 508 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FOXR1Q6PIV2 292 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 IGF2-ASQ6U949 168 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 KYAT3Q6YP21 454 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SLC26A9Q7LBE3 791 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 EFL1Q7Z2Z2 1120 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GRIN3AQ8TCU5 1115 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 LMX1AQ8TE12 382 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 HIC2Q96JB3 615 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 VCPIP1Q96JH7 1222 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 LENG8Q96PV6 779 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SLC13A1Q9BZW2 595 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FAM117AQ9C073 453 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 RETREG1Q9H6L5 497 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ATP13A1Q9HD20 1204 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FZD3Q9NPG1 666 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 APEX2Q9UBZ4 518 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 VPS51Q9UID3 782 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PCDHGA8Q9Y5G5 932 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 OR51B4Q9Y5P0 310 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms