RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ATP13A1Q9HD20 1204 aa15.53■□□□□ 0.08
USB1-202ENST00000423271 NDFIP2Q9NV92 336 aa15.53■□□□□ 0.08
USB1-202ENST00000423271 ARHGAP20Q9P2F6 1191 aa15.53■□□□□ 0.08
USB1-202ENST00000423271 PPARGC1AQ9UBK2 798 aaKnown RBP15.53■□□□□ 0.08
USB1-202ENST00000423271 NEU3Q9UQ49 428 aa15.53■□□□□ 0.08
USB1-202ENST00000423271 ACTL7AQ9Y615 435 aa15.53■□□□□ 0.08
USB1-202ENST00000423271 CHD5Q8TDI0 1954 aa15.53■□□□□ 0.08
USB1-202ENST00000423271 ZZEF1O43149 2961 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 KPNA3O00505 521 aaPredicted RBP15.52■□□□□ 0.08
USB1-202ENST00000423271 ZNF821O75541 412 aaPredicted RBP15.52■□□□□ 0.08
USB1-202ENST00000423271 KRT3P12035 628 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 CD38P28907 300 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 CHRNA3P32297 505 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 ACVRL1P37023 503 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 CLCN6P51797 869 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 TAS2R38P59533 333 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 ARF5P84085 180 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 GNA12Q03113 381 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 PIP5KL1Q5T9C9 394 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 ZNF783Q6ZMS7 281 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 GLRX5Q86SX6 157 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 C3orf20Q8ND61 904 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 GRIN3AQ8TCU5 1115 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 BAP1Q92560 729 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 CENPIQ92674 756 aaPredicted RBP15.52■□□□□ 0.08
USB1-202ENST00000423271 SELENOOQ9BVL4 669 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 TTYH3Q9C0H2 523 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 TOR4AQ9NXH8 423 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 OR12D3Q9UGF7 316 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 MSRB2Q9Y3D2 182 aa15.52■□□□□ 0.08
USB1-202ENST00000423271 FREM2Q5SZK8 3169 aa15.52■□□□□ 0.07
USB1-202ENST00000423271 A0A1B0GTQ1 180 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 TCRBV5S1A1TA0A578 114 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 CCP110O43303 1012 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 CBFA2T2O43439 604 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 PCDHGA12O60330 932 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 LRIG2O94898 1065 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 CALB1P05937 261 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 TPM3P06753 285 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 ATXN1LP0C7T5 689 aaKnown RBP15.51■□□□□ 0.07
USB1-202ENST00000423271 GPD1P21695 349 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 SERPINH1P50454 418 aaKnown RBP15.51■□□□□ 0.07
USB1-202ENST00000423271 NRG1Q02297 640 aaPredicted RBP15.51■□□□□ 0.07
USB1-202ENST00000423271 SUZ12Q15022 739 aaKnown RBP15.51■□□□□ 0.07
USB1-202ENST00000423271 SHBQ15464 509 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 ARL13BQ3SXY8 428 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 NAPEPLDQ6IQ20 393 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 RWDD4Q6NW29 188 aaKnown RBP15.51■□□□□ 0.07
USB1-202ENST00000423271 WDR59Q6PJI9 974 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 DPY19L3Q6ZPD9 716 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 NLRP14Q86W24 1093 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 GATAD2AQ86YP4 633 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 ADAMTS14Q8WXS8 1223 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 CCDC114Q96M63 670 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 ELF4Q99607 663 aaPredicted RBP15.51■□□□□ 0.07
USB1-202ENST00000423271 OSBPL2Q9H1P3 480 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 KDM4CQ9H3R0 1056 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 CA5BQ9Y2D0 317 aa15.51■□□□□ 0.07
USB1-202ENST00000423271 FCF1Q9Y324 198 aaKnown RBP15.51■□□□□ 0.07
USB1-202ENST00000423271 LRRC53A6NM62 1247 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 GOLGA8CPA6NN73 597 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 CD160O95971 181 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 PLEKP08567 350 aaPredicted RBP15.5■□□□□ 0.07
USB1-202ENST00000423271 RHOQP17081 205 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 GRK6P43250 576 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 NXPH1P58417 271 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
USB1-202ENST00000423271 ARSIQ5FYB1 569 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 FIGNQ5HY92 759 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 RETSATQ6NUM9 610 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 DNAJC24Q6P3W2 148 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 PRPF39Q86UA1 669 aaKnown RBP15.5■□□□□ 0.07
USB1-202ENST00000423271 TRIM69Q86WT6 500 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 TMIEQ8NEW7 156 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 NTAN1Q96AB6 310 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 TBC1D31Q96DN5 1066 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 MCEEQ96PE7 176 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 CDC6Q99741 560 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 SYT11Q9BT88 431 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 PREBQ9HCU5 417 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 GDF3Q9NR23 364 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 TMEM248Q9NWD8 314 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 TAS2R14Q9NYV8 317 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 IL36AQ9UHA7 158 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 DNAI1Q9UI46 699 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 TPX2Q9ULW0 747 aaKnown RBP15.5■□□□□ 0.07
USB1-202ENST00000423271 MYO6Q9UM54 1294 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 APOBEC2Q9Y235 224 aaKnown RBP15.5■□□□□ 0.07
USB1-202ENST00000423271 FARP1Q9Y4F1 1045 aaPredicted RBP15.5■□□□□ 0.07
USB1-202ENST00000423271 WASF2Q9Y6W5 498 aa15.5■□□□□ 0.07
USB1-202ENST00000423271 PTPRBP23467 1997 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 PLXNB3Q9ULL4 1909 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 FAM221BA6H8Z2 402 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 SIGLEC16A6NMB1 481 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 TLR4O00206 839 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 RNGTTO60942 597 aaKnown RBP15.49■□□□□ 0.07
USB1-202ENST00000423271 LEFTY1O75610 366 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 PRNPP04156 253 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 PRLRP16471 622 aa15.49■□□□□ 0.07
USB1-202ENST00000423271 FERP16591 822 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms