RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 ZNF432O94892 652 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 LDLRP01130 860 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 RRM1P23921 792 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 SPATA5L1Q9BVQ7 753 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 MRPL9Q9BYD2 267 aaKnown RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 MCCC2Q9HCC0 563 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 TSPAN16Q9UKR8 245 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 BARX2Q9UMQ3 279 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 MATN4O95460 622 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 TUFMP49411 452 aaKnown RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 SEC24CP53992 1094 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 ABRQ12979 859 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 MAP1SQ66K74 1059 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 SAMD3Q8N6K7 520 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 CHMP1AQ9HD42 196 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 SNX4O95219 450 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 MASP1P48740 699 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 CACNA2D1P54289 1103 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 FAM187BQ17R55 369 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 WDR49Q8IV35 697 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 FBXO30Q8TB52 745 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 TET3O43151 1660 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 GRXCR2A6NFK2 248 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 SLC28A2O43868 658 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 DGKAP23743 735 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 RAB27AP51159 221 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 OAFQ86UD1 273 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 SERPINB11Q96P15 392 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 NOD2Q9HC29 1040 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 ANKRD6Q9Y2G4 727 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 CPSF1Q10570 1443 aaKnown RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 A0A1B0GTH6 734 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 NKRFO15226 690 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 MAPK7Q13164 816 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 PEX6Q13608 980 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 LINC00116Q8NCU8 138 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 ZNF483Q8TF39 744 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 CD248Q9HCU0 757 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 DNMT3LQ9UJW3 386 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 SLC12A4Q9UP95 1085 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 ZNF879B4DU55 563 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 PSMD9O00233 223 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 TOP3BO95985 862 aaKnown RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 N4BP2L1Q5TBK1 243 aaPredicted RBP13.72□□□□□ -0.21
COL20A1-203ENST00000422202 KAT5Q92993 513 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 DCUN1D5Q9BTE7 237 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 ZFP14Q9HCL3 533 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 ELOVL2Q9NXB9 296 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 ROBO2Q9HCK4 1378 aa13.72□□□□□ -0.21
COL20A1-203ENST00000422202 TRIM64BA6NI03 449 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 NQO1P15559 274 aaKnown RBP13.71□□□□□ -0.21
COL20A1-203ENST00000422202 CXCR2P25025 360 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 NPTX2P47972 431 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 NEK3P51956 506 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 CDH8P55286 799 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 ATCAYQ86WG3 371 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 ADSSL1Q8N142 457 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 ZNF276Q8N554 614 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 DPF2Q92785 391 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 ELMO3Q96BJ8 720 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 MARK4Q96L34 752 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 NUDT5Q9UKK9 219 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 CDH9Q9ULB4 789 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 CAMSAP1Q5T5Y3 1602 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 ERCC2P18074 760 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 KCNA5P22460 613 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 PTPN5P54829 565 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 FSCN1Q16658 493 aaKnown RBP13.71□□□□□ -0.21
COL20A1-203ENST00000422202 SLC41A1Q8IVJ1 513 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 ADCY4Q8NFM4 1077 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 VPS35Q96QK1 796 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 ASB8Q9H765 288 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 VPS4AQ9UN37 437 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 A0A1W2PQJ5 194 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 SLC7A2P52569 658 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 BHLHB9Q6PI77 547 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 ADHFE1Q8IWW8 467 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 LRRC34Q8IZ02 419 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3DA0A087WVF3 549 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3IA0A087WXS9 549 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3EA0A087X179 549 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3KA0A087X1G2 549 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3FA6NER0 549 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3LB9A6J9 549 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3HP0C7X1 549 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TPP2P29144 1249 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-203ENST00000422202 LRPAP1P30533 357 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 BMPR2Q13873 1038 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 XKR6Q5GH73 641 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3GQ6DHY5 549 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3CQ6IPX1 549 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 IZUMO2Q6UXV1 221 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-203ENST00000422202 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 TBC1D3Q8IZP1 549 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-203ENST00000422202 OR6Y1Q8NGX8 325 aa13.71□□□□□ -0.21
COL20A1-203ENST00000422202 LMAN2LQ9H0V9 348 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms