RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 DDIT4Q9NX09 232 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 BCAP29Q9UHQ4 241 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 DNAJC25-GNG10A0A024R161 153 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 XPO1O14980 1071 aaKnown RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 DCLK1O15075 740 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 DDHD2O94830 711 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 NCAM1P13591 858 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 FGFR3P22607 806 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 CD68P34810 354 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 PTK2BQ14289 1009 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 ZYG11AQ6WRX3 759 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 OTOP3Q7RTS5 596 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 RNF135Q8IUD6 432 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 DENND6AQ8IWF6 608 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 LINC01465Q8N7H1 131 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 SNX31Q8N9S9 440 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 PRICKLE1Q96MT3 831 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 NPY6RQ99463 290 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 CASS4Q9NQ75 786 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 UBQLN1Q9UMX0 589 aaKnown RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 DNAH12Q6ZR08 3092 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 SHROOM3Q8TF72 1996 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 NRP1O14786 923 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 H2AFYO75367 372 aaKnown RBP15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 DAB1O75553 588 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 ARSAP15289 507 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 RGS2P41220 211 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 CDKL1Q00532 357 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 DGKDQ16760 1214 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 KLHDC10Q6PID8 442 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 EDEM1Q92611 657 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 MRPL1Q9BYD6 325 aaKnown RBP15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 CACNG4Q9UBN1 327 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 PIN4Q9Y237 131 aaKnown RBP15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 DENRO43583 198 aaKnown RBP15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 VAPBO95292 243 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 TNFAIP8O95379 198 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 HNRNPLP14866 589 aaKnown RBP eCLIP15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 CYP2B6P20813 491 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 MPP1Q00013 466 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 SH2D4BQ5SQS7 431 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 OLFML2BQ68BL8 750 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 GK5Q6ZS86 529 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 PGAM4Q8N0Y7 254 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 METTL25Q8N6Q8 603 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 SPATA22Q8NHS9 363 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 KLHL32Q96NJ5 620 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 ULBP1Q9BZM6 244 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 CYP4F12Q9HCS2 524 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 NDUFA13Q9P0J0 144 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 RIMS3Q9UJD0 308 aa15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 COPG1Q9Y678 874 aaKnown RBP15.4■□□□□ 0.06
SEMA3B-203ENST00000419007 SMIM28A0A1B0GU29 152 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 SCNN1AP37088 669 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 MYBPC1Q00872 1141 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ZBTB6Q15916 424 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ZFP1Q6P2D0 407 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 LAYNQ6UX15 382 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ZC3HC1Q86WB0 502 aaKnown RBP15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 EGFL6Q8IUX8 553 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ATP6V1E2Q96A05 226 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ISL2Q96A47 359 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 NXNL1Q96CM4 212 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 C16orf70Q9BSU1 422 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 FTHL17Q9BXU8 183 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 DUSP16Q9BY84 665 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 PCDHAC1Q9H158 963 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ACOT9Q9Y305 439 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 NEMP2A6NFY4 417 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ASB14A6NK59 587 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 YJEFN3A6XGL0 299 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 KCNU1A8MYU2 1149 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 VILLO15195 856 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 DLX3O60479 287 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 CABYRO75952 493 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 MT-CO1P00395 513 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 APOA4P06727 396 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 FAM58BPP0C7Q3 252 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 NPR3P17342 541 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 TAF6P49848 677 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 CSE1LP55060 971 aaKnown RBP15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 NOTUMQ6P988 496 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 AMIGO2Q86SJ2 522 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 OSTM1Q86WC4 334 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 RNF34Q969K3 372 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 IL22Q9GZX6 179 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 IRAK4Q9NWZ3 460 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 RAB26Q9ULW5 256 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 CLEC11AQ9Y240 323 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 I6L893 689 aaPredicted RBP15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 AHSGP02765 367 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 SBK3P0C264 359 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 SLC35E2BP0CK96 405 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 ITPRIPL1Q6GPH6 555 aa15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 RWDD4Q6NW29 188 aaKnown RBP15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 RPS27LQ71UM5 84 aaKnown RBP15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 SETD3Q86TU7 594 aaPredicted RBP15.39■□□□□ 0.05
SEMA3B-203ENST00000419007 CATSPER1Q8NEC5 780 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms