RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SPRP35270 261 aaPredicted RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 PPM1AP35813 382 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 ATP5C1P36542 298 aaKnown RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 HADHAP40939 763 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 DEFB103AP81534 67 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 CREMQ03060 361 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 CDK18Q07002 472 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 ACTN3Q08043 901 aaPredicted RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 BTG3Q14201 252 aaPredicted RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SEPT7Q16181 437 aaKnown RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 LRRC26Q2I0M4 334 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SPRED3Q2MJR0 410 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SPDYAQ5MJ70 313 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 HECTD3Q5T447 861 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 MROH9Q5TGP6 573 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 TMCO4Q5TGY1 634 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 KIAA0930Q6ICG6 404 aaPredicted RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 PKN3Q6P5Z2 889 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 CHST9Q7L1S5 443 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 OTOAQ7RTW8 1153 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 MIB1Q86YT6 1006 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 GBP7Q8N8V2 638 aaPredicted RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 DNAAF3Q8N9W5 541 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SPATA22Q8NHS9 363 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 USP33Q8TEY7 942 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SPOCK2Q92563 424 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 TMEM169Q96HH4 297 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 RPRD1AQ96P16 312 aaPredicted RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 PAIP2Q9BPZ3 127 aaKnown RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 FICDQ9BVA6 458 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 PRKD2Q9BZL6 878 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 MAGEH1Q9H213 219 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 C11orf49Q9H6J7 331 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 MANSC1Q9H8J5 431 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SP110Q9HB58 689 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 PDFQ9HBH1 243 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 RXFP1Q9HBX9 757 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SLCO1B3Q9NPD5 702 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 TREX1Q9NSU2 369 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 ABCF3Q9NUQ8 709 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 PCMTD2Q9NV79 361 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 PIH1D1Q9NWS0 290 aaKnown RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SPG21Q9NZD8 308 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 TRPM5Q9NZQ8 1165 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 SLC17A6Q9P2U8 582 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 STOML2Q9UJZ1 356 aa9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 MRPL42Q9Y6G3 142 aaKnown RBP9.2□□□□□ -0.94
LINCMD1-201ENST00000418518 ZNF106Q9H2Y7 1883 aaKnown RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 SCN8AQ9UQD0 1980 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 H3BNC9 293 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 J3KR12 359 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 GFRA2O00451 464 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 C2CD2LO14523 706 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 TPP1O14773 563 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 COCHO43405 550 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 TIMM44O43615 452 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 DNAJC8O75937 253 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 PAPSS2O95340 614 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 GJB5O95377 273 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 OLFM2O95897 454 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 MT-CYBP00156 380 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 GSRP00390 522 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 MYCP01106 439 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 URODP06132 367 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 BPGMP07738 259 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 ERVK-10P10266 1014 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 NMBRP28336 390 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 HOXD9P28356 352 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 SLC6A4P31645 630 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 POLD2P49005 469 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 SLC11A2P49281 568 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 SERPINB8P50452 374 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 KCNQ1P51787 676 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 CDH4P55283 916 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 WNT3AP56704 352 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 MSLNQ13421 630 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 PDE1CQ14123 709 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 MARC1Q5VT66 337 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 KIAA1841Q6NSI8 718 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 CES3Q6UWW8 571 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 FAM47EQ6ZV65 393 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 TFAP2DQ7Z6R9 452 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 GALNT7Q86SF2 657 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 CLEC14AQ86T13 490 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 LCA5Q86VQ0 697 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 KCNMB4Q86W47 210 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 NDUFAF2Q8N183 169 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 PPHLN1Q8NEY8 458 aaKnown RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 IPMKQ8NFU5 416 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 ARRDC2Q8TBH0 407 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 PTPRN2Q92932 1015 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 MFSD3Q96ES6 412 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 MYEOVQ96EZ4 313 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 RMDN2Q96LZ7 410 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 C7orf26Q96N11 449 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 GPR22Q99680 433 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 APOL2Q9BQE5 337 aa9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 KLF16Q9BXK1 252 aaPredicted RBP9.19□□□□□ -0.94
LINCMD1-201ENST00000418518 IQCGQ9H095 443 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms