RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 TEKT5Q96M29 485 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 ABHD16BQ9H3Z7 469 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 SLC2A6Q9UGQ3 507 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 FIS1Q9Y3D6 152 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 SHROOM3Q8TF72 1996 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 MBLAC1A4D2B0 266 aaPredicted RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 HDAC3O15379 428 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 XPOTO43592 962 aaKnown RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 XRCC1P18887 633 aaPredicted RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 CLCNKBP51801 687 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 MS4A2Q01362 244 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 ACAD11Q709F0 780 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 TMC7Q7Z402 723 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 FAM35AQ86V20 835 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 CENPLQ8N0S6 344 aaPredicted RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 LPPQ93052 612 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 NXNL1Q96CM4 212 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 IL22Q9GZX6 179 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 TMEM114B3SHH9 223 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 F2P00734 622 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 ENO3P13929 434 aaPredicted RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 DPP6P42658 865 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 GALNT2Q10471 571 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 ANO4Q32M45 955 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 ESRP1Q6NXG1 681 aaKnown RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 RPS27LQ71UM5 84 aaKnown RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 SDCCAG8Q86SQ7 713 aaPredicted RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 APLFQ8IW19 511 aaPredicted RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 LSMEM2Q8N112 164 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 IPMKQ8NFU5 416 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 HDAC11Q96DB2 347 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 TRAPPC9Q96Q05 1148 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 SLC9A7Q96T83 725 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 DRC3Q9H069 523 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
HDAC9-208ENST00000417496 XPR1Q9UBH6 696 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 RAP2CQ9Y3L5 183 aa14.71□□□□□ -0.05
HDAC9-208ENST00000417496 NEMP2A6NFY4 417 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 STRNO43815 780 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 DLX3O60479 287 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 GSTT1P30711 240 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 CDH17Q12864 832 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 MFSD10Q14728 455 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 LIPMQ5VYY2 423 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 CWF19L1Q69YN2 538 aaKnown RBP14.7□□□□□ -0.06
HDAC9-208ENST00000417496 ZYG11AQ6WRX3 759 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 JADE3Q92613 823 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 NTAN1Q96AB6 310 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 GAD1Q99259 594 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 GPR22Q99680 433 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 ZDHHC7Q9NXF8 308 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 AK5Q9Y6K8 562 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 RGSL1A5PLK6 1076 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 AURKAO14965 403 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 NCAM2O15394 837 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 FBXO21O94952 628 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 THRAP10827 490 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 ALDH1A3P47895 512 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 NPY2RP49146 381 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 FOLH1Q04609 750 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 SCAPQ12770 1279 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 CYLC2Q14093 348 aaPredicted RBP14.7□□□□□ -0.06
HDAC9-208ENST00000417496 CNPY1Q3B7I2 92 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 ARL13BQ3SXY8 428 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 METTL21CQ5VZV1 264 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 BHLHA9Q7RTU4 235 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 KYQ8NBH2 561 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 TRIM4Q9C037 500 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 PRDM16Q9HAZ2 1276 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 MIOSQ9NXC5 875 aa14.7□□□□□ -0.06
HDAC9-208ENST00000417496 TRIP12Q14669 1992 aaPredicted RBP14.7□□□□□ -0.06
HDAC9-208ENST00000417496 CCL15-CCL14A0A0B4J2E2 113 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 MAGEB16A2A368 324 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 CASTOR2A6NHX0 329 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 PGM3O95394 542 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 PGK1P00558 417 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
HDAC9-208ENST00000417496 HNRNPLP14866 589 aaKnown RBP eCLIP14.69□□□□□ -0.06
HDAC9-208ENST00000417496 NUMBP49757 651 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 ROR2Q01974 943 aaKnown RBP14.69□□□□□ -0.06
HDAC9-208ENST00000417496 CEACAM7Q14002 265 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 GK3PQ14409 553 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 PDK3Q15120 406 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 TLR1Q15399 786 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 CCL15Q16663 113 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 LIN52Q52LA3 116 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 OLFML2BQ68BL8 750 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 IQSEC1Q6DN90 963 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 ITPRIPL1Q6GPH6 555 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 SNX31Q8N9S9 440 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 SREK1Q8WXA9 508 aaKnown RBP14.69□□□□□ -0.06
HDAC9-208ENST00000417496 PPP1R10Q96QC0 940 aaKnown RBP14.69□□□□□ -0.06
HDAC9-208ENST00000417496 NPAS2Q99743 824 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 SH3GL3Q99963 347 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 NDFIP2Q9NV92 336 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 STK39Q9UEW8 545 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 NUDT5Q9UKK9 219 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 TRHDEQ9UKU6 1024 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 SBF1O95248 1867 aa14.69□□□□□ -0.06
HDAC9-208ENST00000417496 OR6B1O95007 311 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms