RNA–Protein interactions for RNA: ENST00000416247.3

SMIM13-202, Transcript of small integral membrane protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM13, Length 4,688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-202ENST00000416247 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMIM13-202ENST00000416247 MORF4L1Q9UBU8 362 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 TDRKHQ9Y2W6 561 aaKnown RBP16.37■□□□□ 0.21
SMIM13-202ENST00000416247 CACNA1FO60840 1977 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 TBL1XO60907 577 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 TSPAN8P19075 237 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 PKNOX1P55347 436 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 MBTD1Q05BQ5 628 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 TAF10Q12962 218 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 PDK4Q16654 411 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 FNDC3BQ53EP0 1204 aaKnown RBP16.37■□□□□ 0.21
SMIM13-202ENST00000416247 CMC1Q7Z7K0 106 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 SPATA6LQ8N4H0 392 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 PTGR2Q8N8N7 351 aaPredicted RBP16.37■□□□□ 0.21
SMIM13-202ENST00000416247 CENPTQ96BT3 561 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 LRRC4CQ9HCJ2 640 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 ASAH2Q9NR71 780 aa16.37■□□□□ 0.21
SMIM13-202ENST00000416247 APOA1P02647 267 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 ACADMP11310 421 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 ME2P23368 584 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SLC16A1P53985 500 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SFSWAPQ12872 951 aaKnown RBP16.36■□□□□ 0.21
SMIM13-202ENST00000416247 MFSD4BQ5TF39 518 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SLC30A9Q6PML9 568 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 USP45Q70EL2 814 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 TTC7BQ86TV6 843 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 STK40Q8N2I9 435 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 FIG4Q92562 907 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 CAMKK2Q96RR4 588 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 NTPCRQ9BSD7 190 aaKnown RBP16.36■□□□□ 0.21
SMIM13-202ENST00000416247 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 TRPC4Q9UBN4 977 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 ZBTB14O43829 449 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 MSLNQ13421 630 aaPredicted RBP16.36■□□□□ 0.21
SMIM13-202ENST00000416247 IL27RAQ6UWB1 636 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 CCDC149Q6ZUS6 474 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 CFAP52Q8N1V2 620 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 C12orf42Q96LP6 360 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 CXorf56Q9H5V9 222 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SPACA6W5XKT8 324 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 MDM4O15151 490 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 UBE3AQ05086 875 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 CSTF3Q12996 717 aaKnown RBP16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SLC10A6Q3KNW5 377 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SETMARQ53H47 684 aaPredicted RBP16.36■□□□□ 0.21
SMIM13-202ENST00000416247 LRRC49Q8IUZ0 686 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 PCDH20Q8N6Y1 951 aaKnown RBP16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SLC4A11Q8NBS3 891 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 ADAM28Q9UKQ2 775 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 DUSP11O75319 330 aaKnown RBP16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SMNDC1O75940 238 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMIM13-202ENST00000416247 TRABD2AQ86V40 505 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 ATG16L2Q8NAA4 619 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 RSPH1Q8WYR4 309 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 SUSD6Q92537 303 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 HDAC10Q969S8 669 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 KLHL4Q9C0H6 718 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 KLQ9UEF7 1012 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 LZTS1Q9Y250 596 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 STARD13Q9Y3M8 1113 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 PCDHB9Q9Y5E1 797 aa16.36■□□□□ 0.21
SMIM13-202ENST00000416247 ATRNL1Q5VV63 1379 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 A0A087X1B8 175 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 STXBP5Q5T5C0 1151 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 STX19Q8N4C7 294 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 PLD5Q8N7P1 536 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 OR52K2Q8NGK3 314 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 SLC25A23Q9BV35 468 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 PLK2Q9NYY3 685 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 NOCTQ9UK39 431 aaKnown RBP16.35■□□□□ 0.21
SMIM13-202ENST00000416247 NR2E1Q9Y466 385 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 IFT172Q9UG01 1749 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 TRAV19A0A0A6YYK7 116 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 M0R2N6 131 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 FKTNO75072 461 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 ATP5F1P24539 256 aaPredicted RBP16.35■□□□□ 0.21
SMIM13-202ENST00000416247 CLCNKBP51801 687 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 ALDH6A1Q02252 535 aaKnown RBP16.35■□□□□ 0.21
SMIM13-202ENST00000416247 CDK18Q07002 472 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 TAF5Q15542 800 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 KCNA10Q16322 511 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 SLC24A5Q71RS6 500 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 NECAB2Q7Z6G3 386 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 MARK4Q96L34 752 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 TTPALQ9BTX7 342 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 NFKBIZQ9BYH8 718 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 FAM126AQ9BYI3 521 aaPredicted RBP16.35■□□□□ 0.21
SMIM13-202ENST00000416247 SAR1AQ9NR31 198 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 MAN1C1Q9NR34 630 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 TMCC3Q9ULS5 477 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 MRPS23Q9Y3D9 190 aaKnown RBP16.35■□□□□ 0.21
SMIM13-202ENST00000416247 PARNO95453 639 aaKnown RBP16.35■□□□□ 0.21
SMIM13-202ENST00000416247 CYP2A6P11509 494 aaPredicted RBP16.35■□□□□ 0.21
SMIM13-202ENST00000416247 CDKN2BP42772 138 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 LILRA4P59901 499 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 SNRPD1P62314 119 aaKnown RBP16.35■□□□□ 0.21
SMIM13-202ENST00000416247 JAG1P78504 1218 aa16.35■□□□□ 0.21
SMIM13-202ENST00000416247 RUNX1T1Q06455 604 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms