RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 RAG1P15918 1043 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 SAT1P21673 171 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 GRIA4P48058 902 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 RPL14P50914 215 aaKnown RBP13.52□□□□□ -0.24
CSTF2-203ENST00000415585 USP10Q14694 798 aaKnown RBP13.52□□□□□ -0.24
CSTF2-203ENST00000415585 PPP2R5DQ14738 602 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 PM20D1Q6GTS8 502 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 LINC00523Q86TU6 105 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 TMEM86AQ8N2M4 240 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.52□□□□□ -0.24
CSTF2-203ENST00000415585 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.24
CSTF2-203ENST00000415585 USP33Q8TEY7 942 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 GDPD5Q8WTR4 605 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 CNDP1Q96KN2 507 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 RHOBTB2Q9BYZ6 727 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 KLHL4Q9C0H6 718 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 VCX3BQ9H321 246 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 PTCH2Q9Y6C5 1203 aa13.52□□□□□ -0.24
CSTF2-203ENST00000415585 H3BNX3 289 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 AP3B1O00203 1094 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 NEMP1O14524 444 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 PIGNO95427 931 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 SLC35E2BP0CK96 405 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 DNAJB2P25686 324 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 PIK3R1P27986 724 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 PEX2P28328 305 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 GABRB3P28472 473 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 EPHA3P29320 983 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 AVPR1AP37288 418 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 GLRBP48167 497 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 CLCNKBP51801 687 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 AFF1P51825 1210 aaKnown RBP13.52□□□□□ -0.25
CSTF2-203ENST00000415585 MSLNQ13421 630 aaPredicted RBP13.52□□□□□ -0.25
CSTF2-203ENST00000415585 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 LSM12Q3MHD2 195 aaKnown RBP13.52□□□□□ -0.25
CSTF2-203ENST00000415585 ARL13AQ5H913 290 aaPredicted RBP13.52□□□□□ -0.25
CSTF2-203ENST00000415585 THEMIS2Q5TEJ8 643 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 SEL1L3Q68CR1 1132 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 DCLRE1AQ6PJP8 1040 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 TAC4Q86UU9 113 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 KBTBD6Q86V97 674 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 KLHDC8BQ8IXV7 354 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 C3orf58Q8NDZ4 430 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 SMARCD1Q96GM5 515 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 PPP1R36Q96LQ0 422 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 TSNARE1Q96NA8 513 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 SPATS2LQ9NUQ6 558 aaKnown RBP13.52□□□□□ -0.25
CSTF2-203ENST00000415585 SLC38A7Q9NVC3 462 aa13.52□□□□□ -0.25
CSTF2-203ENST00000415585 RUVBL2Q9Y230 463 aaKnown RBP13.52□□□□□ -0.25
CSTF2-203ENST00000415585 COL4A4P53420 1690 aaPredicted RBP13.52□□□□□ -0.25
CSTF2-203ENST00000415585 C17orf102A2RUQ5 167 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 PSMD3O43242 534 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 GRID2O43424 1007 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 CACNG3O60359 315 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 CABYRO75952 493 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 AHSGP02765 367 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 THRAP10827 490 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 GNAT1P11488 350 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 PRKAA2P54646 552 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 AQP4P55087 323 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 HUNKP57058 714 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 SLC12A1Q13621 1099 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 PPM1LQ5SGD2 360 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 ARHGAP36Q6ZRI8 547 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 ACAD11Q709F0 780 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 SNX32Q86XE0 403 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 SLC41A1Q8IVJ1 513 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 CENPLQ8N0S6 344 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-203ENST00000415585 SPATA22Q8NHS9 363 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 STYXQ8WUJ0 223 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 KCTD4Q8WVF5 259 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 SCYL1Q96KG9 808 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 TSGA13Q96PP4 275 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 GAD1Q99259 594 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 ZDHHC2Q9UIJ5 367 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 CDH9Q9ULB4 789 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 EME2A4GXA9 379 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-203ENST00000415585 RGSL1A5PLK6 1076 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 AIM2O14862 343 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 TFEBP19484 476 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 NUDT2P50583 147 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 HK2P52789 917 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 NAGLUP54802 743 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 COG7P83436 770 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 XIAPP98170 497 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 BEX3Q00994 111 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 PRKAA1Q13131 559 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 TRIP10Q15642 601 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 PCID2Q5JVF3 399 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 PKN3Q6P5Z2 889 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 TMC7Q7Z402 723 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 FSTL5Q8N475 847 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-203ENST00000415585 NUF2Q9BZD4 464 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 MIOSQ9NXC5 875 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 PACSIN3Q9UKS6 424 aa13.51□□□□□ -0.25
CSTF2-203ENST00000415585 TARM1B6A8C7 271 aa13.5□□□□□ -0.25
CSTF2-203ENST00000415585 DFFAO00273 331 aa13.5□□□□□ -0.25
CSTF2-203ENST00000415585 CASQ2O14958 399 aaPredicted RBP13.5□□□□□ -0.25
CSTF2-203ENST00000415585 DDHD2O94830 711 aa13.5□□□□□ -0.25
CSTF2-203ENST00000415585 MT-CYBP00156 380 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms