RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ALKBH5Q6P6C2 394 aaKnown RBP13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 SPATS2Q86XZ4 545 aaKnown RBP13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 FUKQ8N0W3 1084 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 CPXM2Q8N436 756 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 ZNF366Q8N895 744 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 MAPK15Q8TD08 544 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 DDI1Q8WTU0 396 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 SLC20A1Q8WUM9 679 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 TRIM11Q96F44 468 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 CDK5RAP1Q96SZ6 601 aaKnown RBP13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 DUSP16Q9BY84 665 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 KRT82Q9NSB4 513 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 FAM49BQ9NUQ9 324 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 GEMIN8Q9NWZ8 242 aaKnown RBP13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 NAGPAQ9UK23 515 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 SRPK3Q9UPE1 567 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 SCML2Q9UQR0 700 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 NBASA2RRP1 2371 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 A0A087X0T9 212 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 M0QYV0 167 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 WNT9AO14904 365 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 ZSCAN12O43309 604 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 SDC3O75056 442 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 AP1G2O75843 785 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 KLKB1P03952 638 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 CYP1A1P04798 512 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 ATP5BP06576 529 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 CCDC175P0C221 793 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 FAM228BP0C875 321 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 RARGP13631 454 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 CCDC130P13994 396 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 ADORA2BP29275 332 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 BST2Q10589 180 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 CLEC16AQ2KHT3 1053 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 SLC25A45Q8N413 288 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 ZNF276Q8N554 614 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 WDR36Q8NI36 951 aaKnown RBP13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 CYB5D2Q8WUJ1 264 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 HSFY1Q96LI6 401 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 ZNF830Q96NB3 372 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 ZSWIM1Q9BR11 485 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 INTUQ9ULD6 942 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 BSNQ9UPA5 3926 aa13.92□□□□□ -0.18
RAPGEF1-204ENST00000414781 TP53BP1Q12888 1972 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 EFSO43281 561 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 LATO43561 262 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 RNASEH2AO75792 299 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 FTLP02792 175 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 ITGA2BP08514 1039 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 DLDP09622 509 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 H2AFZP0C0S5 128 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 MYBL1P10243 752 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 UNGP13051 313 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 CORO1AP31146 461 aaKnown RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 GPD2P43304 727 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 MAGEA1P43355 309 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 ACADSBP45954 432 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 PSEN1P49768 467 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 CENPCQ03188 943 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 NAA35Q5VZE5 725 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 RAD9BQ6WBX8 426 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 PAQR9Q6ZVX9 377 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 H2AFVQ71UI9 128 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 PHF13Q86YI8 300 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 AHI1Q8N157 1196 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 TPCN2Q8NHX9 752 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 UBA3Q8TBC4 463 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 ZNF564Q8TBZ8 553 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 SLC35F5Q8WV83 523 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 ATXN7L3BQ96GX2 97 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 PRR11Q96HE9 360 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 PCDHB18PQ96TA0 734 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 OMDQ99983 421 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 ISCUQ9H1K1 167 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 EPN3Q9H201 632 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 ADNPQ9H2P0 1102 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 SYNCQ9H7C4 482 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 PNPLA8Q9NP80 782 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 OSER1Q9NX31 292 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 STRIP2Q9ULQ0 834 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 CLEC4EQ9ULY5 219 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 DMTF1Q9Y222 760 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 PLXNA2O75051 1894 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 RELNP78509 3460 aa13.91□□□□□ -0.18
RAPGEF1-204ENST00000414781 A0A1W2PNU3 283 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 A0A1W2PP55 124 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 ANKRD62A6NC57 917 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 XPO1O14980 1071 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 MDM4O15151 490 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 CALCAP01258 141 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 CALB1P05937 261 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 RALAP11233 206 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 DGKAP23743 735 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 NOMO3P69849 1222 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 CST6Q15828 149 aa13.9□□□□□ -0.18
RAPGEF1-204ENST00000414781 MPPE1Q53F39 396 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms