RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 A0A1W2PP55 124 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 METTL12A8MUP2 240 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 K7ERQ8 282 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 KPNA3O00505 521 aaPredicted RBP14.99□□□□□ -0.01
CHD1-202ENST00000414220 MTA2O94776 668 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 LCA5LO95447 670 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 VAV1P15498 845 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 GLDCP23378 1020 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 IL1R2P27930 398 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 GJC1P36383 396 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 PTGER3P43115 390 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 SERINC3Q13530 473 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 PLA2G2CQ5R387 149 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 POLNQ7Z5Q5 900 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 OR2A12Q8NGT7 310 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 OR14C36Q8NHC7 312 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 NSMCE1Q8WV22 266 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 HMCESQ96FZ2 354 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 BAG1Q99933 345 aaPredicted RBP14.99□□□□□ -0.01
CHD1-202ENST00000414220 TNKS2Q9H2K2 1166 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 KDM4CQ9H3R0 1056 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 SP110Q9HB58 689 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 OSGEPQ9NPF4 335 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 HECAQ9UBI9 543 aaPredicted RBP14.99□□□□□ -0.01
CHD1-202ENST00000414220 UBA2Q9UBT2 640 aaPredicted RBP14.99□□□□□ -0.01
CHD1-202ENST00000414220 PILRBQ9UKJ0 227 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 PPM1HQ9ULR3 514 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 FCF1Q9Y324 198 aaKnown RBP14.99□□□□□ -0.01
CHD1-202ENST00000414220 PCDHA13Q9Y5I0 950 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 PIEZO1Q92508 2521 aa14.99□□□□□ -0.01
CHD1-202ENST00000414220 FAM47DPA6NHR8 397 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 DFFAO00273 331 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 SMAD6O43541 496 aaKnown RBP14.98□□□□□ -0.01
CHD1-202ENST00000414220 POP4O95707 220 aaKnown RBP14.98□□□□□ -0.01
CHD1-202ENST00000414220 IGSF6O95976 241 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 GSRP00390 522 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 ITPKAP23677 461 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 ACSL1P33121 698 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 ATXN3P54252 364 aaPredicted RBP14.98□□□□□ -0.01
CHD1-202ENST00000414220 GSDMDP57764 484 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 RHOAP61586 193 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 SLC25A11Q02978 314 aaKnown RBP14.98□□□□□ -0.01
CHD1-202ENST00000414220 TCEAL1Q15170 157 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 TMCO4Q5TGY1 634 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 DCAF12L1Q5VU92 463 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 DAB2IPQ5VWQ8 1189 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.98□□□□□ -0.01
CHD1-202ENST00000414220 BBS5Q8N3I7 341 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 SPC24Q8NBT2 197 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 OR2T34Q8NGX1 318 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 SNX19Q92543 992 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 CELF6Q96J87 481 aaKnown RBP14.98□□□□□ -0.01
CHD1-202ENST00000414220 GDAP1L1Q96MZ0 367 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 CALN1Q9BXU9 219 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 OSBPL1AQ9BXW6 950 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 SLC39A8Q9C0K1 460 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 MIR1-1HGQ9H1L0 117 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 NEUROG2Q9H2A3 272 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 LRRC19Q9H756 370 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 PCDH18Q9HCL0 1135 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 CD93Q9NPY3 652 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 EVLQ9UI08 416 aaPredicted RBP14.98□□□□□ -0.01
CHD1-202ENST00000414220 SLC6A14Q9UN76 642 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 CKAP5Q14008 2032 aa14.98□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3DA0A087WVF3 549 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3IA0A087WXS9 549 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3EA0A087X179 549 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3KA0A087X1G2 549 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3FA6NER0 549 aaPredicted RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3LB9A6J9 549 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 SPOPO43791 374 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 NRDCO43847 1150 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 FSBPO95073 299 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 NDUFA10O95299 355 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 CFIP05156 583 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 SYPP08247 313 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3HP0C7X1 549 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 PAPOLAP51003 745 aaKnown RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 CCNHP51946 323 aaPredicted RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 NAP1L1P55209 391 aaKnown RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 DPYSQ14117 519 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 RFTN1Q14699 578 aaPredicted RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 GRM3Q14832 879 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 CCDC6Q16204 474 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TRIM61Q5EBN2 209 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 ARSIQ5FYB1 569 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3GQ6DHY5 549 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3CQ6IPX1 549 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 DPY19L3Q6ZPD9 716 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 CYP4V2Q6ZWL3 525 aaPredicted RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 LRRC49Q8IUZ0 686 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 SLC41A1Q8IVJ1 513 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 TBC1D3Q8IZP1 549 aaPredicted RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 OR2AP1Q8NGE2 309 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 NETO1Q8TDF5 533 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 SKA1Q96BD8 255 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 CSPG4P5Q96PW8 444 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 ZNF670Q9BS34 389 aa14.97□□□□□ -0.01
CHD1-202ENST00000414220 MAK16Q9BXY0 300 aaKnown RBP14.97□□□□□ -0.01
CHD1-202ENST00000414220 TM6SF2Q9BZW4 377 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms