RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 GMFGO60234 142 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PLA2G6O60733 806 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SMIM24O75264 130 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 MYO1DO94832 1006 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FKBP9O95302 570 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PRAMEF12O95522 483 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 IFNA14P01570 189 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 A1BGP04217 495 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CKMP06732 381 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TPOP07202 933 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ACAA1P09110 424 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CLTAP09496 248 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 RARBP10826 455 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GHRP10912 638 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 LAMP2P13473 410 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ATF6P18850 670 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TKTP29401 623 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ALDH3A1P30838 453 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 VIPR1P32241 457 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PTGER3P43115 390 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GPR3P46089 330 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 RGS19P49795 217 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FXR1P51114 621 aaKnown RBP eCLIP3.72□□□□□ -1.815e-6■■■□□ 17.7
SF3B1-203ENST00000414174 ADCY7P51828 1080 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 MLLT6P55198 1093 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TAS2R40P59535 323 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GPX6P59796 221 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ERVFRD-1P60508 538 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PSMC5P62195 406 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SUMO1P63165 101 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 YBX1P67809 324 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 RPP30P78346 268 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GCNT1Q02742 428 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GAD2Q05329 585 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PPATQ06203 517 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SLFN5Q08AF3 891 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 LMAN2Q12907 356 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PAK1Q13153 545 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 NOGQ13253 232 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ITGB3BPQ13352 177 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 XRCC4Q13426 336 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TRA2AQ13595 282 aaKnown RBP eCLIP3.72□□□□□ -1.811e-8■□□□□ 10.4
SF3B1-203ENST00000414174 PMS2P11Q13670 270 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 THOC5Q13769 683 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TOB2Q14106 344 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 LRRC32Q14392 662 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 LPIN1Q14693 890 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 USP10Q14694 798 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 KCNAB1Q14722 419 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 POLD3Q15054 466 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 HSP90AA4PQ58FG1 418 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TTMPQ5BVD1 217 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF805Q5CZA5 627 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SAPCD1Q5SSQ6 148 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CEP85LQ5SZL2 805 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 RARS2Q5T160 578 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 THEM4Q5T1C6 240 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ATXN7L2Q5T6C5 722 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SLC9C2Q5TAH2 1124 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GKAP1Q5VSY0 366 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CACHD1Q5VU97 1274 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 YOD1Q5VVQ6 348 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ARHGAP17Q68EM7 881 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SPECC1LQ69YQ0 1117 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TANGO2Q6ICL3 276 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CASC4Q6P4E1 433 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ISLR2Q6UXK2 745 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SLC36A4Q6YBV0 504 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 UNC5AQ6ZN44 842 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FKBP9P1Q75LS8 142 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FGD2Q7Z6J4 655 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TMCO2Q7Z6W1 182 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 NEK8Q86SG6 692 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 KBTBD6Q86V97 674 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FAM129CQ86XR2 697 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CDKL3Q8IVW4 592 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 MAPKAPK5Q8IW41 473 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SCN4BQ8IWT1 228 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 GRAMD1CQ8IYS0 662 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TP53I13Q8NBR0 393 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SETD9Q8NE22 299 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TMIEQ8NEW7 156 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PDCD6IPQ8WUM4 868 aaKnown RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 OSCP1Q8WVF1 389 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 DPF2Q92785 391 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF566Q969W8 418 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 VPS33AQ96AX1 596 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 SYTL4Q96C24 671 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PHF21BQ96EK2 531 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 C1GALT1C1Q96EU7 318 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 PGAP3Q96FM1 320 aaPredicted RBP3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ABHD8Q96I13 439 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CFAP57Q96MR6 1250 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 TSNARE1Q96NA8 513 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 JMJD8Q96S16 334 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 NEU1Q99519 415 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 FAM118BQ9BPY3 351 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 ZFYVE21Q9BQ24 234 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 CCM2Q9BSQ5 444 aa3.72□□□□□ -1.81
SF3B1-203ENST00000414174 MTG1Q9BT17 334 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms