RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 BNIP3LO60238 219 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 CSO75390 466 aaKnown RBP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 DAB1O75553 588 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 CSF2P04141 144 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 PRNPP04156 253 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 ERBB2P04626 1255 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 ALPPL2P10696 532 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 NME1P15531 152 aaKnown RBP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 HNRNPKP61978 463 aaKnown RBP eCLIP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 CCDC15Q0P6D6 951 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 FZD2Q14332 565 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 ISXQ2M1V0 245 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 HS1BP3Q53T59 392 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 EFHC1Q5JVL4 640 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 SMYD5Q6GMV2 418 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 ISM2Q6H9L7 571 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 KLHL10Q6JEL2 608 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 C22orf39Q6P5X5 142 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 GJB7Q6PEY0 223 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 Q6ZSR6 202 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 ENOSF1Q7L5Y1 443 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 DCP2Q8IU60 420 aaKnown RBP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 ATP11CQ8NB49 1132 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 ZNF548Q8NEK5 533 aaPredicted RBP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 ZNF397Q8NF99 534 aaPredicted RBP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 NELFBQ8WX92 580 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 SHC3Q92529 594 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 RNF34Q969K3 372 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 NT5C3BQ969T7 300 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 PRR11Q96HE9 360 aaPredicted RBP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 NAF1Q96HR8 494 aaKnown RBP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 NPY6RQ99463 290 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 C2orf49Q9BVC5 232 aaPredicted RBP12.44□□□□□ -0.42
LIMS2-210ENST00000413578 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 DPH1Q9BZG8 443 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 PIGVQ9NUD9 493 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 WASF2Q9Y6W5 498 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 DOCK9Q9BZ29 2069 aa12.44□□□□□ -0.42
LIMS2-210ENST00000413578 COL27A1Q8IZC6 1860 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 IGLV3-10A0A075B6K4 115 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 SPTY2D1-AS1A0A0U1RR47 76 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 POM121BA6NF01 834 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 NEMP2A6NFY4 417 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 J3QKU1 62 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 RAD51BO15315 384 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 ZMPSTE24O75844 475 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 NEBLO76041 1014 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 ADCY5O95622 1261 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 GNA14O95837 355 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 RHOCP08134 193 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 TFE3P19532 575 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 TGM2P21980 687 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 NOS2P35228 1153 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 CXCR3P49682 368 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 DUSP3P51452 185 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 KRT83P78385 493 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 NME3Q13232 169 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 MORC3Q14149 939 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 PTPN20Q4JDL3 420 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 TAF1BQ53T94 588 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 ZNF542PQ5EBM4 170 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 TPRG1LQ5T0D9 272 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 ARHGAP40Q5TG30 622 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 OR6B2Q6IFH4 312 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 TRIM65Q6PJ69 517 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 DPY19L3Q6ZPD9 716 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 C11orf57Q6ZUT1 292 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 SETD3Q86TU7 594 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 C1orf131Q8NDD1 294 aaKnown RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 KCNE4Q8WWG9 221 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 VOPP1Q96AW1 172 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 PGAP3Q96FM1 320 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 VCPIP1Q96JH7 1222 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 CCDC114Q96M63 670 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 KLF6Q99612 283 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 MUC3BQ9H195 1237 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 KLF15Q9UIH9 416 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.43□□□□□ -0.42
LIMS2-210ENST00000413578 FADS3Q9Y5Q0 445 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 CSNK1G3Q9Y6M4 447 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 MYO18BQ8IUG5 2567 aa12.43□□□□□ -0.42
LIMS2-210ENST00000413578 BICDL2A1A5D9 508 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 EME2A4GXA9 379 aaPredicted RBP12.42□□□□□ -0.42
LIMS2-210ENST00000413578 M0QYT0 321 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
LIMS2-210ENST00000413578 LEFTY1O75610 366 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 PCDH8O95206 1070 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 ADRB3P13945 408 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 NEK3P51956 506 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 SLC6A3Q01959 620 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 APBA1Q02410 837 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
LIMS2-210ENST00000413578 ARSIQ5FYB1 569 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 BRMS1LQ5PSV4 323 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 BROXQ5VW32 411 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 KIAA1161Q6NSJ0 714 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 ZCCHC8Q6NZY4 707 aaKnown RBP12.42□□□□□ -0.42
LIMS2-210ENST00000413578 LINGO4Q6UY18 593 aa12.42□□□□□ -0.42
LIMS2-210ENST00000413578 PTAR1Q7Z6K3 402 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms