RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RIN3Q8TB24 985 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 PGLYRP2Q96PD5 576 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 CCT7Q99832 543 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 GBA3Q9H227 469 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 IARS2Q9NSE4 1012 aaKnown RBP17.9■□□□□ 0.46
SDCBP-202ENST00000413219 TRHDEQ9UKU6 1024 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 FZD1Q9UP38 647 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 WDR90Q96KV7 1748 aa17.9■□□□□ 0.46
SDCBP-202ENST00000413219 MYO18AQ92614 2054 aaKnown RBP17.9■□□□□ 0.46
SDCBP-202ENST00000413219 MYOCOSA0A1B0GUC4 107 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 ARHGEF37A1IGU5 675 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 KCNK1O00180 336 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 EEF2KO00418 725 aaKnown RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 PPEF2O14830 753 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 PEX10O60683 326 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 USP12O75317 370 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 TRPA1O75762 1119 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 H6PDO95479 791 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 INSRRP14616 1297 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 ABCG1P45844 678 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 CCR10P46092 362 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 ADARP55265 1226 aaKnown RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 PSME3P61289 254 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 RHDQ02161 417 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 IKBKEQ14164 716 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 MAPRE2Q15555 327 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 DCAF4L1Q3SXM0 396 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 IL23RQ5VWK5 629 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 MAMDC4Q6UXC1 1216 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 ZC3HC1Q86WB0 502 aaKnown RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 RBM12BQ8IXT5 1001 aaKnown RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 KDM1BQ8NB78 822 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 NETO2Q8NC67 525 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 CEP70Q8NHQ1 597 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 ADAM32Q8TC27 787 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 SCYL1Q96KG9 808 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 BIRC8Q96P09 236 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 UHRF1Q96T88 793 aaPredicted RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 UNC93B1Q9H1C4 597 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 SARDHQ9UL12 918 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 AKT3Q9Y243 479 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 HES2Q9Y543 173 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 C7orf72A4D263 438 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 C9IYK1 514 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 IMPDH2P12268 514 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 NOS2P35228 1153 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 GMPSP49915 693 aaPredicted RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 IGBP1P78318 339 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 PPIDQ08752 370 aaKnown RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 STX5Q13190 355 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 CERCAMQ5T4B2 595 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 ITPRIPL1Q6GPH6 555 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 TRIML2Q8N7C3 387 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 TMA16Q96EY4 203 aaKnown RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 NPY6RQ99463 290 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 NPAS2Q99743 824 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 LPIN3Q9BQK8 851 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 DNAJC5Q9H3Z4 198 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 IPO11Q9UI26 975 aaKnown RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 RUVBL2Q9Y230 463 aaKnown RBP17.89■□□□□ 0.45
SDCBP-202ENST00000413219 PCDHGA7Q9Y5G6 932 aa17.89■□□□□ 0.45
SDCBP-202ENST00000413219 H3BNH8 94 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 XPO1O14980 1071 aaKnown RBP17.88■□□□□ 0.45
SDCBP-202ENST00000413219 SLC35E2BP0CK96 405 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 AIF1P55008 147 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 USP10Q14694 798 aaKnown RBP17.88■□□□□ 0.45
SDCBP-202ENST00000413219 ZBTB6Q15916 424 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 INTS6LQ5JSJ4 861 aaKnown RBP17.88■□□□□ 0.45
SDCBP-202ENST00000413219 TREML2Q5T2D2 321 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 LRRC8EQ6NSJ5 796 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 PELI3Q8N2H9 469 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 BEST2Q8NFU1 509 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 HM13Q8TCT9 377 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 ATP6V1E2Q96A05 226 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 MLPHQ9BV36 600 aaPredicted RBP17.88■□□□□ 0.45
SDCBP-202ENST00000413219 COQ10BQ9H8M1 238 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 PNPLA3Q9NST1 481 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 STAP1Q9ULZ2 295 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 MYRFQ9Y2G1 1151 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 CITO14578 2027 aa17.88■□□□□ 0.45
SDCBP-202ENST00000413219 SDHDO14521 159 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 DLX3O60479 287 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 UGP2Q16851 508 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 PRAMEF18Q5VWM3 479 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 DHRS4L2Q6PKH6 230 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 PAOXQ6QHF9 649 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 FSTL5Q8N475 847 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 FAM149B1Q96BN6 582 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 MOCOSQ96EN8 888 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 SLC9A7Q96T83 725 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 ADA2Q9NZK5 511 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 EVPLQ92817 2033 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 FAM155AB1AL88 458 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 ZBTB24O43167 697 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 JUNP05412 331 aaKnown RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 F7P08709 466 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 PTPN1P18031 435 aaKnown RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 SLC7A1P30825 629 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 HCAR3P49019 387 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 LPIN1Q14693 890 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms