RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 OSCP1Q8WVF1 389 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ALG14Q96F25 216 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ASIC4Q96FT7 647 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 OXNAD1Q96HP4 312 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 LMLNQ96KR4 655 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 LRRC3BQ96PB8 259 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ZIM3Q96PE6 472 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 PPP1R2P1Q96PQ5 205 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 FCRL5Q96RD9 977 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 SPON2Q9BUD6 331 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 S1PR5Q9H228 398 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 SEMA4AQ9H3S1 761 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 LRRC40Q9H9A6 602 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 TRPV4Q9HBA0 871 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 GLOD4Q9HC38 313 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 XAB2Q9HCS7 855 aaKnown RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 NT5MQ9NPB1 228 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 SPHK2Q9NRA0 654 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 CLDND1Q9NY35 253 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 OBP2AQ9NY56 170 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 PLK2Q9NYY3 685 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 NINJ2Q9NZG7 142 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 MARK1Q9P0L2 795 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 UBA2Q9UBT2 640 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 VPS51Q9UID3 782 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 VPS28Q9UK41 221 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 CDH7Q9ULB5 785 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 CLEC4EQ9ULY5 219 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 COLQQ9Y215 455 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 NUP205Q92621 2012 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 SZT2Q5T011 3432 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 GOLGA6CA6NDK9 693 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 SOX1O00570 391 aaPredicted RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 MUSKO15146 869 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ALOX15BO15296 676 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 SNAP91O60641 907 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 AVILO75366 819 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ZMPSTE24O75844 475 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ANXA9O76027 345 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ACSL3O95573 720 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 TTC4O95801 387 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 MT-CYBP00156 380 aaPredicted RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 CYP17A1P05093 508 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ABHD2P08910 425 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 GOLGA6DP0CG33 693 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 CD70P32970 193 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 LTBRP36941 435 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 GRIA1P42261 906 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 MAGEA4P43358 317 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 MAXP61244 160 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 SARNPP82979 210 aaKnown RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 MLLT1Q03111 559 aaPredicted RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 OLIG2Q13516 323 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 SPARCL1Q14515 664 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 PRPSAP1Q14558 356 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 EML3Q32P44 896 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 PLEKHG6Q3KR16 790 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 BBS9Q3SYG4 887 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 FUT11Q495W5 492 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 CCDC38Q502W7 563 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 DNAJC21Q5F1R6 531 aaKnown RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 ATAT1Q5SQI0 421 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 LY6G5CQ5SRR4 150 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ALS2CLQ60I27 953 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ALG1LQ6GMV1 187 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 NAPEPLDQ6IQ20 393 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 CES5AQ6NT32 575 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 LRRC8BQ6P9F7 803 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 LRIG3Q6UXM1 1119 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 MTERF4Q7Z6M4 381 aaKnown RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 TMEM25Q86YD3 366 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ANKMY2Q8IV38 441 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 CCDC117Q8IWD4 279 aaPredicted RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 APCDD1Q8J025 514 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 IQCKQ8N0W5 287 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 BBS5Q8N3I7 341 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 PGBD5Q8N414 524 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ZNF557Q8N988 423 aaPredicted RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 ATP11CQ8NB49 1132 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 SMRP1Q8NCR6 262 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 FBXO36Q8NEA4 188 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 SPATA22Q8NHS9 363 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 FIBINQ8TAL6 211 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ARRDC2Q8TBH0 407 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 BPIFB1Q8TDL5 484 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 IRF7Q92985 503 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 IMP4Q96G21 291 aaKnown RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 MSLNLQ96KJ4 702 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 C9orf72Q96LT7 481 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 RIPOR3Q96MK2 946 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 TTC25Q96NG3 672 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 PSKH2Q96QS6 385 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 RUFY1Q96T51 708 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 MGME1Q9BQP7 344 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 FEM1AQ9BSK4 669 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 C2orf49Q9BVC5 232 aaPredicted RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 CINPQ9BW66 212 aaPredicted RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 BBS2Q9BXC9 721 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 POLR1EQ9GZS1 481 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms