RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PTGIRP43119 386 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 MTIF2P46199 727 aaKnown RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 HIRAP54198 1017 aaPredicted RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 ATP2C1P98194 919 aaPredicted RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 GNA12Q03113 381 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 TOP3AQ13472 1001 aaPredicted RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 NAB1Q13506 487 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 KCNC3Q14003 757 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 LRRC14Q15048 493 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 DLGAP5Q15398 846 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 RPS6KA1Q15418 735 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 DLG2Q15700 870 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 HLFQ16534 295 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PPP1R3AQ16821 1122 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CLNKQ7Z7G1 428 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 MICU2Q8IYU8 434 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 IFNL2Q8IZJ0 200 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 OXR1Q8N573 874 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 FNDC5Q8NAU1 212 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 CDCA5Q96FF9 252 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PANX3Q96QZ0 392 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 RPF2Q9H7B2 306 aaKnown RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 ZC4H2Q9NQZ6 224 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 VPS45Q9NRW7 570 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PKD2L2Q9NZM6 624 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 POLIQ9UNA4 740 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ST14Q9Y5Y6 855 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PTCH2Q9Y6C5 1203 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ZNF532Q9HCE3 1301 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 RTL9Q8NET4 1388 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ACOD1A6NK06 481 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ASNA1O43681 348 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 GAS7O60861 476 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 GGPS1O95749 300 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 TTLL1O95922 423 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 FABP1P07148 127 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PIK3R1P27986 724 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PEX2P28328 305 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 RBL1P28749 1068 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 LRRC63Q05C16 580 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 BNIP3Q12983 259 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ASIC2Q16515 512 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 AANATQ16613 207 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PDK4Q16654 411 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CYP1B1Q16678 543 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 GEN1Q17RS7 908 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 TAF1BQ53T94 588 aaPredicted RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 MANEAQ5SRI9 462 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 SULT6B1Q6IMI4 303 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 HMBOX1Q6NT76 420 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 SPATC1Q76KD6 591 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 RIOX2Q8IUF8 465 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 OR4M2Q8NGB6 313 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 OR4D10Q8NGI6 311 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PDXPQ96GD0 296 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ASB2Q96Q27 587 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 EIF2AK1Q9BQI3 630 aaKnown RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 NYXQ9GZU5 481 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 NAPBQ9H115 298 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 AGO3Q9H9G7 860 aaKnown RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 NMUR1Q9HB89 426 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 DBNLQ9UJU6 430 aaKnown RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 ADAMTS6Q9UKP5 1117 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 VAV3Q9UKW4 847 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PCDHA4Q9UN74 947 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PCDHB3Q9Y5E6 796 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ZHX2Q9Y6X8 837 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 FPGT-TNNI3KV9GXZ4 949 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 MROH5Q6ZUA9 1318 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 GPR171O14626 319 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 RRP8O43159 456 aaKnown RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 SERPINI2O75830 405 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CHRNA1P02708 482 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CYP2C8P10632 490 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CKBP12277 381 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ADH7P40394 386 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 SLC1A4P43007 532 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 RECQLP46063 649 aaPredicted RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 RFX5P48382 616 aaPredicted RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 IRX4P78413 519 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 IL9RQ01113 521 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 PEX6Q13608 980 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 DOC2AQ14183 400 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 TRIM25Q14258 630 aaKnown RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 SLC29A2Q14542 456 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 FASTKD3Q14CZ7 662 aaKnown RBP5.31□□□□□ -1.56
HERC4-205ENST00000412272 KYNUQ16719 465 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 MINDY4Q4G0A6 757 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 SLC9C1Q4G0N8 1177 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ZNF618Q5T7W0 954 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ZNF852Q6ZMS4 543 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 C1orf122Q6ZSJ8 110 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 LYSMD3Q7Z3D4 306 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ADCK1Q86TW2 530 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 TDRPQ86YL5 185 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 CAMKK1Q8N5S9 505 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ANKFN1Q8N957 763 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 DNAAF3Q8N9W5 541 aa5.31□□□□□ -1.56
HERC4-205ENST00000412272 ZBTB44Q8NCP5 570 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms