RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SNX16P57768 344 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SLC6A3Q01959 620 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 APBA1Q02410 837 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 PAK1Q13153 545 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 MORC3Q14149 939 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 TAF1BQ53T94 588 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 OLFML1Q6UWY5 402 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 GCNT7Q6ZNI0 430 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SLC26A9Q7LBE3 791 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 PTAR1Q7Z6K3 402 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ABI3BPQ7Z7G0 1075 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 DCP2Q8IU60 420 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 CREBRFQ8IUR6 639 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 C1orf131Q8NDD1 294 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 FAM174AQ8TBP5 190 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 IFT43Q96FT9 208 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 HIC2Q96JB3 615 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 BMFQ96LC9 184 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 FAM81BQ96LP2 452 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 HDAC8Q9BY41 377 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 TKTL2Q9H0I9 626 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 TNKS2Q9H2K2 1166 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SYNCQ9H7C4 482 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 POLR1BQ9H9Y6 1135 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 CPNE5Q9HCH3 593 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 PIGVQ9NUD9 493 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 IL36AQ9UHA7 158 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 PCDHGC3Q9UN70 934 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SNX10Q9Y5X0 201 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 HS3ST3A1Q9Y663 406 aa14.57□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SETXQ7Z333 2677 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 A0A0D9SEW6 157 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 LY6G6EA0A0G2JKS1 128 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 A6NNZ2 444 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 K7ESM1 405 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ERVH48-1M5A8F1 160 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 LEFTY1O75610 366 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 NEBLO76041 1014 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ENDOD1O94919 500 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 RECQLP46063 649 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 CXCR3P49682 368 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 CLCN6P51797 869 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 TMPRSS3P57727 454 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 RNASE9P60153 205 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ERVPABLB-1P60509 514 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 HNRNPKP61978 463 aaKnown RBP eCLIP14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 PTK2Q05397 1052 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 TMEM259Q4ZIN3 620 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ARHGAP40Q5TG30 622 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 OTUD1Q5VV17 481 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 C22orf39Q6P5X5 142 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 LRRC31Q6UY01 552 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 DPY19L3Q6ZPD9 716 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 TFAP2DQ7Z6R9 452 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SETD3Q86TU7 594 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 FAM181AQ8N9Y4 354 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 DCAF4L2Q8NA75 395 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 MAPK15Q8TD08 544 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SHC3Q92529 594 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 PPP1R16AQ96I34 528 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 NPY6RQ99463 290 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 DUSP23Q9BVJ7 150 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SLC17A9Q9BYT1 436 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 USP29Q9HBJ7 922 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ANLNQ9NQW6 1124 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 EVA1BQ9NVM1 165 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ARHGEF38Q9NXL2 777 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 MPP6Q9NZW5 540 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 APEX2Q9UBZ4 518 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 U3KQA8 63 aa14.56□□□□□ -0.08
HLA-DQB2-229ENST00000411527 KALRNO60229 2985 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 POM121BA6NF01 834 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 CAPN8A6NHC0 703 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 DRGXA6NNA5 263 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 I6L893 689 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 DXOO77932 396 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 FGFR1OPO95684 399 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 PAK4O96013 591 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 TFE3P19532 575 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 KRT9P35527 623 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SULT1E1P49888 294 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 NEK3P51956 506 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 UCNP55089 124 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 RPS21P63220 83 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 RHDQ02161 417 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 FZD2Q14332 565 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 PTPN20Q4JDL3 420 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 BRMS1LQ5PSV4 323 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 GBP6Q6ZN66 633 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ZNF683Q8IZ20 524 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 ZNF397Q8NF99 534 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 OR7D4Q8NG98 312 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 IFI44Q8TCB0 444 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 KCNE4Q8WWG9 221 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 FEM1CQ96JP0 617 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 SPON2Q9BUD6 331 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 TMPRSS4Q9NRS4 437 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 RRN3Q9NYV6 651 aa14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.55□□□□□ -0.08
HLA-DQB2-229ENST00000411527 IPO11Q9UI26 975 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms