RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 MST1RQ04912 1400 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 NOTCH2Q04721 2471 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 A0A1B0GU03 582 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 ANTXRLA6NF34 631 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 NPIPB13A6NJU9 1138 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 NPIPB5A8MRT5 1133 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 NPIPB4C9JG80 1138 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 KIF3BO15066 747 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 SERPINI2O75830 405 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 FGF18O76093 207 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 TNFRSF6BO95407 300 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 HOXB9P17482 250 aaPredicted RBP1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 CD72P21854 359 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 C21orf33P30042 268 aaPredicted RBP1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 KRT2P35908 639 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 KCNJ4P48050 445 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 HSPA7P48741 367 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 CLCN3P51790 818 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 ZNF132P52740 706 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 RCAN1P53805 252 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 POU3F1Q03052 451 aaPredicted RBP1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 CDK18Q07002 472 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 SF3A3Q12874 501 aaKnown RBP eCLIP1.59□□□□□ -2.159e-7■■■■■ 44.5
RNU2-55P-201ENST00000411146 DMP1Q13316 513 aaPredicted RBP1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 SNTA1Q13424 505 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 HLFQ16534 295 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 COBLL1Q53SF7 1204 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 XKR9Q5GH70 373 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 TBC1D9BQ66K14 1250 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 TYW3Q6IPR3 259 aaKnown RBP1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 ADAM5Q6NVV9 412 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 TMEM88Q6PEY1 159 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 FBXO38Q6PIJ6 1188 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 SATL1Q86VE3 508 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 IGFN1Q86VF2 1251 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 WDR75Q8IWA0 830 aaKnown RBP1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 DCUN1D3Q8IWE4 304 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 ADPRHL1Q8NDY3 354 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 CTCFLQ8NI51 663 aaPredicted RBP1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 BICD2Q8TD16 824 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 STYXQ8WUJ0 223 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 KCNJ9Q92806 393 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 CD101Q93033 1021 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 KIAA1191Q96A73 305 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 HES6Q96HZ4 224 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 TXNDC15Q96J42 360 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 CSF3RQ99062 836 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 HERC2P3Q9BVR0 1158 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 PTPRHQ9HD43 1115 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 TLR8Q9NR97 1041 aaKnown RBP1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 HELLSQ9NRZ9 838 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 SLC22A11Q9NSA0 550 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 NLKQ9UBE8 527 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 IL36RNQ9UBH0 155 aa1.59□□□□□ -2.15
RNU2-55P-201ENST00000411146 SMCHD1A6NHR9 2005 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 IGLV5-37A0A075B6J1 123 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 A0A1B0GVM2 712 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 MAGEA13PA6NCF6 341 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 SAC3D1A6NKF1 404 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 C3orf70A6NLC5 250 aaPredicted RBP1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 KDM4EB2RXH2 506 aaPredicted RBP1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 CLGNO14967 610 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 PMM2O15305 246 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 ASNA1O43681 348 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 PLA2G6O60733 806 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 DDAH2O95865 285 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 S100BP04271 92 aaPredicted RBP1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 IDEP14735 1019 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 NPPBP16860 134 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 AMD1P17707 334 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 ATF3P18847 181 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 RFC1P35251 1148 aaPredicted RBP1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 STAT1P42224 750 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 DPP6P42658 865 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 PTPN9P43378 593 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 C5orf22Q49AR2 442 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 FBXO43Q4G163 708 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 ZNF569Q5MCW4 686 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 VWA5B1Q5TIE3 1220 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 FAM69BQ5VUD6 431 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 SERPINA11Q86U17 422 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 TTC30AQ86WT1 665 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 FAM185AQ8N0U4 392 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 RBFAQ8N0V3 343 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 ANKRD44Q8N8A2 993 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 STT3BQ8TCJ2 826 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 LRRC8CQ8TDW0 803 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 HMGB4Q8WW32 186 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 WBP2Q969T9 261 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 TMEM18Q96B42 140 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 BICD1Q96G01 975 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 RIPOR3Q96MK2 946 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 TRMT61BQ9BVS5 477 aaKnown RBP1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 TMEM120AQ9BXJ8 343 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 ABHD16BQ9H3Z7 469 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 CXorf56Q9H5V9 222 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 MVB12BQ9H7P6 319 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 PDE11AQ9HCR9 933 aa1.58□□□□□ -2.16
RNU2-55P-201ENST00000411146 SLC39A10Q9ULF5 831 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms