RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 MRFAP1Q9Y605 127 aa15.5■□□□□ 0.07
LSM5-207ENST00000410044 NCOR1O75376 2440 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 GOLGA6L10A0A0M3HER8 536 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 ANTXRLA6NF34 631 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 CCDC188H7C350 402 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 C7P10643 843 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 VAV1P15498 845 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 RBL1P28749 1068 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 RPS9P46781 194 aaKnown RBP15.49■□□□□ 0.07
LSM5-207ENST00000410044 CSNK1DP48730 415 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 STK19P49842 368 aaPredicted RBP15.49■□□□□ 0.07
LSM5-207ENST00000410044 ST8SIA6P61647 398 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 DLG2Q15700 870 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 TEX44Q53QW1 395 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 MARC1Q5VT66 337 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 EGFLAMQ63HQ2 1017 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 DARS2Q6PI48 645 aaKnown RBP15.49■□□□□ 0.07
LSM5-207ENST00000410044 LINGO4Q6UY18 593 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 TRMT11Q7Z4G4 463 aaKnown RBP15.49■□□□□ 0.07
LSM5-207ENST00000410044 ATP11CQ8NB49 1132 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 ATL2Q8NHH9 583 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 ATG4AQ8WYN0 398 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 MAGOHBQ96A72 148 aaKnown RBP15.49■□□□□ 0.07
LSM5-207ENST00000410044 RTP4Q96DX8 246 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 GABRG3Q99928 467 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 FAM118BQ9BPY3 351 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 SEPT3Q9UH03 358 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 SUN2Q9UH99 717 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 ATP8A1Q9Y2Q0 1164 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 ACTL7AQ9Y615 435 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 TECTAO75443 2155 aa15.49■□□□□ 0.07
LSM5-207ENST00000410044 TARSL2A2RTX5 802 aaKnown RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 C5orf60A6NFR6 353 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 K7ERQ8 282 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 SMAD6O43541 496 aaKnown RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 PHF2O75151 1096 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 TMCC1O94876 653 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 NTSR1P30989 418 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 TIE1P35590 1138 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 COILP38432 576 aaPredicted RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 HSPA9P38646 679 aaKnown RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 IL12RB1P42701 662 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 FNTAP49354 379 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 NUMBP49757 651 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 LMNB2Q03252 620 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 CKAP4Q07065 602 aaKnown RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 WASHC5Q12768 1159 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 UBXN2BQ14CS0 331 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 HNRNPA1L2Q32P51 320 aaKnown RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 HEATR6Q6AI08 1181 aaKnown RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 ALG1LQ6GMV1 187 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 MAMSTRQ6ZN01 415 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 PCDH20Q8N6Y1 951 aaKnown RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 CNTD1Q8N815 330 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 IL17RCQ8NAC3 791 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 SPATA4Q8NEY3 305 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 PJA1Q8NG27 643 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 LRRN4Q8WUT4 740 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 PTPRN2Q92932 1015 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 TEKT5Q96M29 485 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 ACOX2Q99424 681 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 FERMT1Q9BQL6 677 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 FOXQ1Q9C009 403 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 FEZ2Q9UHY8 353 aaPredicted RBP15.48■□□□□ 0.07
LSM5-207ENST00000410044 TRHDEQ9UKU6 1024 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 SLC8A2Q9UPR5 921 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 STON1Q9Y6Q2 735 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 CKAP5Q14008 2032 aa15.48■□□□□ 0.07
LSM5-207ENST00000410044 TTC34A8MYJ7 566 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 KCNK1O00180 336 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 RNF40O75150 1001 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 GCATO75600 419 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 JCHAINP01591 159 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 CR2P20023 1033 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 CES1P23141 567 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 PTPN3P26045 913 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 CHRNA3P32297 505 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 MAGEA9P43362 315 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 MMP13P45452 471 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 SNX1Q13596 522 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 FNDC3BQ53EP0 1204 aaKnown RBP15.47■□□□□ 0.07
LSM5-207ENST00000410044 C22orf39Q6P5X5 142 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 SERPINA13PQ6UXR4 307 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 LEKR1Q6ZMV7 388 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 B4GALNT4Q76KP1 1039 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 BMP8AQ7Z5Y6 402 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 CCDC105Q8IYK2 499 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 BBS5Q8N3I7 341 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 SLCO2A1Q92959 643 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 ZNF419Q96HQ0 510 aaPredicted RBP15.47■□□□□ 0.07
LSM5-207ENST00000410044 RUNDC3BQ96NL0 473 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 MGME1Q9BQP7 344 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 TMEM121Q9BTD3 319 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 IER2Q9BTL4 223 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 C10orf88Q9H8K7 445 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 RBM12Q9NTZ6 932 aaKnown RBP15.47■□□□□ 0.07
LSM5-207ENST00000410044 RBM22Q9NW64 420 aaKnown RBP eCLIP15.47■□□□□ 0.07
LSM5-207ENST00000410044 LHX3Q9UBR4 397 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 PCYOX1Q9UHG3 505 aa15.47■□□□□ 0.07
LSM5-207ENST00000410044 ZNF148Q9UQR1 794 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms