RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FAM87AP0C7U9 286 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 JUNDP17535 347 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 SLC5A2P31639 672 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
CHMP3-203ENST00000409225 SRSF6Q13247 344 aaKnown RBP17.07■□□□□ 0.32
CHMP3-203ENST00000409225 SPIDRQ14159 915 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 FGL2Q14314 439 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 ZNF574Q6ZN55 896 aaPredicted RBP17.07■□□□□ 0.32
CHMP3-203ENST00000409225 BEND5Q7L4P6 421 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 JAMLQ86YT9 394 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 ATP11CQ8NB49 1132 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 OR2A12Q8NGT7 310 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 SGF29Q96ES7 293 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 CCDC114Q96M63 670 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 TRIM62Q9BVG3 475 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 SLC17A9Q9BYT1 436 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 MUC3BQ9H195 1237 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 FAM204AQ9H8W3 233 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 POPDC2Q9HBU9 364 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 RCOR1Q9UKL0 485 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 CFAP45Q9UL16 551 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 HPSEQ9Y251 543 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 OR51B4Q9Y5P0 310 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 DOPEY2Q9Y3R5 2298 aa17.07■□□□□ 0.32
CHMP3-203ENST00000409225 RP1P56715 2156 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 RIOK3O14730 519 aaKnown RBP17.06■□□□□ 0.32
CHMP3-203ENST00000409225 SNAP91O60641 907 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 PAK4O96013 591 aaPredicted RBP17.06■□□□□ 0.32
CHMP3-203ENST00000409225 PRNPP04156 253 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 ITGB6P18564 788 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 RRM1P23921 792 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 CMA1P23946 247 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 GGCXP38435 758 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 ACADSBP45954 432 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 RABIFP47224 123 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 RPL34P49207 117 aaKnown RBP17.06■□□□□ 0.32
CHMP3-203ENST00000409225 PDE1CQ14123 709 aaPredicted RBP17.06■□□□□ 0.32
CHMP3-203ENST00000409225 TGIF1Q15583 401 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 ARSIQ5FYB1 569 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 TPRG1LQ5T0D9 272 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 ATL3Q6DD88 541 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 XKR5Q6UX68 686 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 PPM1KQ8N3J5 372 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 GLMNQ92990 594 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 NT5C1BQ96P26 610 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 CCDC3Q9BQI4 270 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 HDAC8Q9BY41 377 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 EPB41L5Q9HCM4 733 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 VANGL2Q9ULK5 521 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 HS3ST2Q9Y278 367 aa17.06■□□□□ 0.32
CHMP3-203ENST00000409225 TRPM6Q9BX84 2022 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 TPP1O14773 563 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 PLD2O14939 933 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 SLC16A3O15427 465 aaKnown RBP17.05■□□□□ 0.32
CHMP3-203ENST00000409225 GPD2P43304 727 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 SYKP43405 635 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 RPIAP49247 311 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 YWHAZP63104 245 aaKnown RBP17.05■□□□□ 0.32
CHMP3-203ENST00000409225 RPS21P63220 83 aaKnown RBP17.05■□□□□ 0.32
CHMP3-203ENST00000409225 C1orf61Q13536 156 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 AUHQ13825 339 aaKnown RBP17.05■□□□□ 0.32
CHMP3-203ENST00000409225 DENND1BQ6P3S1 775 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 SLC35F3Q8IY50 421 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 RBFAQ8N0V3 343 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 FBXO39Q8N4B4 442 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 WDR48Q8TAF3 677 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 PSMB7Q99436 277 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 BOCQ9BWV1 1114 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 TNKS2Q9H2K2 1166 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 TCEAL2Q9H3H9 227 aaPredicted RBP17.05■□□□□ 0.32
CHMP3-203ENST00000409225 DDIT4Q9NX09 232 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 ANKMY1Q9P2S6 941 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 IL36AQ9UHA7 158 aa17.05■□□□□ 0.32
CHMP3-203ENST00000409225 E5RJQ4 531 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 SPINT1O43278 529 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 SMAD6O43541 496 aaKnown RBP17.04■□□□□ 0.32
CHMP3-203ENST00000409225 NOBOXO60393 691 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 LEFTY1O75610 366 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 NTRK1P04629 796 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 ITGB2P05107 769 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 SLC2A3P11169 496 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 CCR1P32246 355 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 UGT1A5P35504 534 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 NEK3P51956 506 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 NDUFA8P51970 172 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 ADKP55263 362 aaKnown RBP17.04■□□□□ 0.32
CHMP3-203ENST00000409225 KRT83P78385 493 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 EIF2B5Q13144 721 aaKnown RBP17.04■□□□□ 0.32
CHMP3-203ENST00000409225 EIF4EBP2Q13542 120 aaPredicted RBP17.04■□□□□ 0.32
CHMP3-203ENST00000409225 TAF5Q15542 800 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 KIAA1161Q6NSJ0 714 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 B3GNT8Q7Z7M8 397 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 C14orf80Q86SX3 495 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 NAT6Q93015 286 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 SLC35C1Q96A29 364 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 LIN37Q96GY3 246 aaPredicted RBP17.04■□□□□ 0.32
CHMP3-203ENST00000409225 PPP1R16AQ96I34 528 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 FEM1CQ96JP0 617 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 SPASTQ9UBP0 616 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 VPS51Q9UID3 782 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms