RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 LGI2Q8N0V4 545 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 PSMG2Q969U7 264 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 VWCEQ96DN2 955 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 IARS2Q9NSE4 1012 aaKnown RBP25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 DCDC2Q9UHG0 476 aa25.06■■□□□ 1.6
DNMT3A-206ENST00000406659 GLRA3O75311 464 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 ABLIM3O94929 683 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 TYK2P29597 1187 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 OR1E1P30953 314 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 ALDH1A3P47895 512 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 YBEYP58557 167 aaPredicted RBP25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 PDE1CQ14123 709 aaPredicted RBP25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 POU6F1Q14863 301 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 POTEHQ6S545 545 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 NUDCD3Q8IVD9 361 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 CCDC117Q8IWD4 279 aaPredicted RBP25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 MRGPRX2Q96LB1 330 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 CYP4F11Q9HBI6 524 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 NPHS2Q9NP85 383 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 TRPM5Q9NZQ8 1165 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 HSFX1Q9UBD0 423 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 ZNF212Q9UDV6 495 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 ZNF840PA6NDX5 716 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 KLF11O14901 512 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 ACSL4O60488 711 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 SLC11A2P49281 568 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 HARS2P49590 506 aaKnown RBP25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 WNT3AP56704 352 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 DSG1Q02413 1049 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 SLC10A7Q0GE19 358 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 ATG16L1Q676U5 607 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 KDELC2Q7Z4H8 507 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 SLC39A11Q8N1S5 342 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 ZNF689Q96CS4 500 aaPredicted RBP25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 KLHL5Q96PQ7 755 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 NSMCE4AQ9NXX6 385 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 SLC12A4Q9UP95 1085 aa25.05■■□□□ 1.6
DNMT3A-206ENST00000406659 CCDC78A2IDD5 438 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 BIRC5O15392 142 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 LIMK2P53671 638 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 CSE1LP55060 971 aaKnown RBP25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 IL10RBQ08334 325 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 OVGP1Q12889 678 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 SERINC3Q13530 473 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 SETDB1Q15047 1291 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 PCSK7Q16549 785 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 GALNTL6Q49A17 601 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 RANBP10Q6VN20 620 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 DCLK2Q8N568 766 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 FITM2Q8N6M3 262 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 PTCD2Q8WV60 388 aaKnown RBP25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 C10orf82Q8WW14 230 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 MYEOVQ96EZ4 313 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 IMP4Q96G21 291 aaKnown RBP25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 MECRQ9BV79 373 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 HERC2P3Q9BVR0 1158 aa25.04■■□□□ 1.6
DNMT3A-206ENST00000406659 GJB5O95377 273 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 HMGA1P17096 107 aaKnown RBP25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 SERPINB8P50452 374 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 KDELC1Q6UW63 502 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 TMCO2Q7Z6W1 182 aaPredicted RBP25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 TEX26Q8N6G2 289 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 ZNF398Q8TD17 642 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 AZIN2Q96A70 460 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 E2F7Q96AV8 911 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 ZNF778Q96MU6 729 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 TRIM55Q9BYV6 548 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 TIMM44O43615 452 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 DCTN3O75935 186 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 BPGMP07738 259 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 TMPRSS15P98073 1019 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 CCDC15Q0P6D6 951 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 BTG3Q14201 252 aaPredicted RBP25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 INSCQ1MX18 579 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 N4BP2L1Q5TBK1 243 aaPredicted RBP25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 KLHDC10Q6PID8 442 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 ATXN7L3BQ96GX2 97 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 ATXN3LQ9H3M9 355 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 MRM3Q9HC36 420 aaKnown RBP25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 SNX15Q9NRS6 342 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 SPG21Q9NZD8 308 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 SIRPGQ9P1W8 387 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 TCAF1Q9Y4C2 921 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 YIPF1Q9Y548 306 aa25.03■■□□□ 1.6
DNMT3A-206ENST00000406659 HGSO14964 777 aaPredicted RBP25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 COCHO43405 550 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 DNAJC8O75937 253 aaPredicted RBP25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 TOP3BO95985 862 aaKnown RBP25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 IL1BP01584 269 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 LAG3P18627 525 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 CD86P42081 329 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 MAXP61244 160 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 DEFB103AP81534 67 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 VEPH1Q14D04 833 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 CHI3L2Q15782 390 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 FSTL4Q6MZW2 842 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 C16orf46Q6P387 395 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 RFWD3Q6PCD5 774 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 CFAP52Q8N1V2 620 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 RAB3IL1Q8TBN0 382 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms