RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 FAM171BQ6P995 826 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 CROCCP3Q8IVE0 287 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ZNF276Q8N554 614 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 UBAP1Q9NZ09 502 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 MARCH2Q9P0N8 246 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ASTN2O75129 1339 aaPredicted RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 MLYCDO95822 493 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 BDNFP23560 247 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 C21orf59P57076 290 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 FSCN1Q16658 493 aaKnown RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ATL1Q8WXF7 558 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 PAIP1Q9H074 479 aaKnown RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 POPDC2Q9HBU9 364 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ING3Q9NXR8 418 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 GTPBP1O00178 669 aaKnown RBP12.2□□□□□ -0.46
SMCR8-201ENST00000406438 PDHXO00330 501 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 TTPAP49638 278 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 RGS1Q08116 209 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 HYIQ5T013 277 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 SV2AQ7L0J3 742 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 CACUL1Q86Y37 369 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 TRPV3Q8NET8 790 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 FBXO25Q8TCJ0 367 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 ZNF606Q8WXB4 792 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 CLIP3Q96DZ5 547 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 SLC4A5Q9BY07 1137 aa12.2□□□□□ -0.46
SMCR8-201ENST00000406438 PAEPP09466 180 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 HOXB8P17481 243 aaPredicted RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 BNC1Q01954 994 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 C9orf131Q5VYM1 1079 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ZNF549Q6P9A3 640 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 FAM83AQ86UY5 434 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 CAMK1DQ8IU85 385 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 REPS2Q8NFH8 660 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 AP3S1Q92572 193 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ABHD16BQ9H3Z7 469 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 RBM7Q9Y580 266 aaKnown RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 DCXO43602 365 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 CSDE1O75534 798 aaKnown RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 AKAP3O75969 853 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ADORA2AP29274 412 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 RPA3P35244 121 aaPredicted RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ANTXR2P58335 489 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 NAA20P61599 178 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ARF5P84085 180 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 TTI2Q6NXR4 508 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ZNF571Q7Z3V5 609 aaPredicted RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 SELENOMQ8WWX9 145 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 MRPL17Q9NRX2 175 aaKnown RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 MSRAQ9UJ68 235 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ZNF780BQ9Y6R6 833 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 CCDC182A6NF36 153 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 WASHC2DQ5SRD0 308 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 C16orf59Q7L2K0 433 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 DLG3Q92796 817 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 SEMA6BQ9H3T3 888 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 TMEM138Q9NPI0 162 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 CAPN6Q9Y6Q1 641 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ITGA2P17301 1181 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ACADLP28330 430 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 POLD2P49005 469 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 TROAPQ12815 778 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 DHRSXQ8N5I4 330 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ACER1Q8TDN7 264 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 PHF10Q8WUB8 498 aaKnown RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 BTBD3Q9Y2F9 522 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 FARP2O94887 1054 aaPredicted RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 HMGCRP04035 888 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 FGFR3P22607 806 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 SMIM11AP58511 58 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ACSM2AQ08AH3 577 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 PTGES3Q15185 160 aaKnown RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 PAPD7Q5XG87 772 aaKnown RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ACSM2BQ68CK6 577 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 SMIM5Q71RC9 77 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 STX12Q86Y82 276 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 GRIN3AQ8TCU5 1115 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 SLC2A14Q8TDB8 520 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 XPNPEP3Q9NQH7 507 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 DDX20Q9UHI6 824 aaKnown RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 DMGDHQ9UI17 866 aaKnown RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 SH3BGRLO75368 114 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 BMPR2Q13873 1038 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 IKBKEQ14164 716 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 TPGS1Q6ZTW0 290 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 KAT5Q92993 513 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ZBTB10Q96DT7 871 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 PRMT6Q96LA8 375 aaPredicted RBP12.19□□□□□ -0.46
SMCR8-201ENST00000406438 EHD4Q9H223 541 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 RHBGQ9H310 441 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ASB7Q9H672 318 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 NUDT5Q9UKK9 219 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 PCDHA11Q9Y5I1 949 aa12.19□□□□□ -0.46
SMCR8-201ENST00000406438 ATP6V1G2O95670 118 aa12.18□□□□□ -0.46
SMCR8-201ENST00000406438 METTL3Q86U44 580 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms