RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 MANSC1Q9H8J5 431 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 CLUHO75153 1309 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 A0A096LPK6 155 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 SPECC1L-ADORA2AF8WAN1 911 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 TIMP1P01033 207 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 PPP3CCP48454 512 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 PITX1P78337 314 aaPredicted RBP9.23□□□□□ -0.93
LIG4-202ENST00000405925 CNGA3Q16281 694 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 SH2D4BQ5SQS7 431 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 ANGPTL8Q6UXH0 198 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 SH3RF2Q8TEC5 729 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 QKIQ96PU8 341 aaKnown RBP eCLIP9.23□□□□□ -0.93
LIG4-202ENST00000405925 EBNA1BP2Q99848 306 aaKnown RBP9.23□□□□□ -0.93
LIG4-202ENST00000405925 SYTL2Q9HCH5 934 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 CLIC5Q9NZA1 410 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 WWOXQ9NZC7 414 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 RNF112Q9ULX5 631 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 KNL1Q8NG31 2342 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 BCLAF3A2AJT9 711 aaKnown RBP9.23□□□□□ -0.93
LIG4-202ENST00000405925 PHGDHO43175 533 aaKnown RBP9.23□□□□□ -0.93
LIG4-202ENST00000405925 ZNF7P17097 686 aaPredicted RBP9.23□□□□□ -0.93
LIG4-202ENST00000405925 DEFB103AP81534 67 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 PLEKHG4Q58EX7 1191 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 SGO1Q5FBB7 561 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 COLGALT2Q8IYK4 626 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 SPATA22Q8NHS9 363 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 PSMG2Q969U7 264 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 HMCESQ96FZ2 354 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 NPY6RQ99463 290 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 TUBB6Q9BUF5 446 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 BPIFA1Q9NP55 256 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 DCDC2Q9UHG0 476 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 CYTH4Q9UIA0 394 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 SCML2Q9UQR0 700 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 TLR6Q9Y2C9 796 aa9.23□□□□□ -0.93
LIG4-202ENST00000405925 C1orf232A0A0U1RR37 186 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 NBNO60934 754 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 PPFIA2O75334 1257 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SERPIND1P05546 499 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 APOA4P06727 396 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 NRLP54845 237 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 BOP1Q14137 746 aaKnown RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 CBX2Q14781 532 aaPredicted RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 DBN1Q16643 649 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 CERCAMQ5T4B2 595 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 DCAF12L1Q5VU92 463 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 KDM7AQ6ZMT4 941 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 UNC5AQ6ZN44 842 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 OTOAQ7RTW8 1153 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SZRD1Q7Z422 152 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 MYO1HQ8N1T3 1032 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 C3orf58Q8NDZ4 430 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 CPT1BQ92523 772 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 LRGUKQ96M69 825 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 MAN1C1Q9NR34 630 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SYBUQ9NX95 663 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 FAM50BQ9Y247 325 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 ARL2BPQ9Y2Y0 163 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 PAPPA2Q9BXP8 1791 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 TXNDC9O14530 226 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 GYG2O15488 501 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 NFATC1O95644 943 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 HTR7P34969 479 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 MAGEA11P43364 429 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 CDH4P55283 916 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 POU4F1Q01851 419 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 DSC2Q02487 901 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SGCGQ13326 291 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SPDYAQ5MJ70 313 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 FBXL22Q6P050 247 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 ZNF567Q8N184 647 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SNX31Q8N9S9 440 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 HIPK4Q8NE63 616 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 ZNF473Q8WTR7 871 aaKnown RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 PLD4Q96BZ4 506 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 FAM161BQ96MY7 647 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 HAPLN3Q96S86 360 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SPATA16Q9BXB7 569 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 PNPLA8Q9NP80 782 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 BAG5Q9UL15 447 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 RRP15Q9Y3B9 282 aaKnown RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 USP15Q9Y4E8 981 aaPredicted RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 MT-CYBP00156 380 aaPredicted RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 CYP2A6P11509 494 aaPredicted RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 TNFRSF8P28908 595 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 ALDH18A1P54886 795 aaKnown RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 KDSRQ06136 332 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 CMTR2Q8IYT2 770 aaKnown RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 ANKLE1Q8NAG6 615 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 TCP10LQ8TDR4 215 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 RPL10LQ96L21 214 aaKnown RBP9.22□□□□□ -0.93
LIG4-202ENST00000405925 TOX2Q96NM4 488 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 CYP2S1Q96SQ9 504 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 CPNE1Q99829 537 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SLC39A8Q9C0K1 460 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 SMOC2Q9H3U7 446 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 VPS45Q9NRW7 570 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 CLDND1Q9NY35 253 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 TAS2R13Q9NYV9 303 aa9.22□□□□□ -0.93
LIG4-202ENST00000405925 EVLQ9UI08 416 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms