RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 SBK3P0C264 359 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 ARCN1P48444 511 aaKnown RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 FLT3LGP49771 235 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 NRG1Q02297 640 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 YWHAHQ04917 246 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 SLC34A1Q06495 639 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 USP4Q13107 963 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 TRIM71Q2Q1W2 868 aaKnown RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 TRMT5Q32P41 509 aaKnown RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 SNX30Q5VWJ9 437 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 EPGNQ6UW88 154 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 STMN2Q93045 179 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 GATA5Q9BWX5 397 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 COG4Q9H9E3 785 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 NMRK1Q9NWW6 199 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 PCDHB8Q9UN66 801 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 ANKRD6Q9Y2G4 727 aa16.49■□□□□ 0.23
CDKN1A-203ENST00000405375 H2AFYO75367 372 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 HLA-DQB2P05538 268 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 APOA4P06727 396 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 OR4Q2P0C623 313 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 SLC35E2BP0CK96 405 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 SKIP12755 728 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 ATP6V1C1P21283 382 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 VHLP40337 213 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 TUBP50607 506 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 SESN3P58005 492 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 ACTR3P61158 418 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 POU6F1Q14863 301 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 CCDC6Q16204 474 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 FAM26DQ5JW98 314 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 KIRREL3Q8IZU9 778 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 RTL3Q8N8U3 475 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 RDH11Q8TC12 318 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 PANX3Q96QZ0 392 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 FICDQ9BVA6 458 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 ACE2Q9BYF1 805 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 OSER1Q9NX31 292 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 CPSF2Q9P2I0 782 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 NUDT5Q9UKK9 219 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 HS3ST4Q9Y661 456 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 A0A088AWK7 358 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 MEI4A8MW99 385 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 E9PAM4 449 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 TK2O00142 265 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 HSPA4LO95757 839 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 ABL2P42684 1182 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 GEMP55040 296 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 CACNB2Q08289 660 aaPredicted RBP16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 NAA25Q14CX7 972 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 POTEHQ6S545 545 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 RIPOR1Q6ZS17 1223 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 C14orf80Q86SX3 495 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 LCA5Q86VQ0 697 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 PTCD2Q8WV60 388 aaKnown RBP16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 DNAJC9Q8WXX5 260 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 ZNF333Q96JL9 665 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 MID2Q9UJV3 735 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 TCAF1Q9Y4C2 921 aa16.48■□□□□ 0.23
CDKN1A-203ENST00000405375 MYLKQ15746 1914 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 A0A1W2PQH9 124 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 PHGDHO43175 533 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 LUC7L3O95232 432 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 VAPBO95292 243 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 ACADSP16219 412 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 PGGT1BP53609 377 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 COPAP53621 1224 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 MLLT6P55198 1093 aaPredicted RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 FCGRTP55899 365 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 MXRA7P84157 204 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 USP10Q14694 798 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 UGP2Q16851 508 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 TIGD7Q6NT04 549 aaPredicted RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 ESRP1Q6NXG1 681 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 RANBP10Q6VN20 620 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 ZYG11AQ6WRX3 759 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 RAPH1Q70E73 1250 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 DENND6AQ8IWF6 608 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 POU5F2Q8N7G0 328 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 MAPK15Q8TD08 544 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 DTX3LQ8TDB6 740 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 SREK1Q8WXA9 508 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 PPP1R2P1Q96PQ5 205 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 LBHD1Q9BQE6 289 aaPredicted RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 TASP1Q9H6P5 420 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 MRM3Q9HC36 420 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 ENTPD7Q9NQZ7 604 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 TREX1Q9NSU2 369 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 TRMT13Q9NUP7 481 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 RBM22Q9NW64 420 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■□□□□ 10.6
CDKN1A-203ENST00000405375 MPP6Q9NZW5 540 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 TLK1Q9UKI8 766 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 MRPL42Q9Y6G3 142 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 MYO16Q9Y6X6 1858 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 WASH4PA8MWX3 477 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 FAM155AB1AL88 458 aaPredicted RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 TARM1B6A8C7 271 aa16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 NVLO15381 856 aaKnown RBP16.47■□□□□ 0.23
CDKN1A-203ENST00000405375 DNAJB1P25685 340 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms