RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 MT-CO1P00395 513 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 CTAGE8P0CG41 777 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 SRCP12931 536 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 VAV1P15498 845 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 MMP13P45452 471 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 STK19P49842 368 aaPredicted RBP16.03■□□□□ 0.16
CDPF1-204ENST00000404744 ITKQ08881 620 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 OASLQ15646 514 aaKnown RBP16.03■□□□□ 0.16
CDPF1-204ENST00000404744 DGKKQ5KSL6 1271 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 SERPINA13PQ6UXR4 307 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 TRMT11Q7Z4G4 463 aaKnown RBP16.03■□□□□ 0.16
CDPF1-204ENST00000404744 CTAGE6Q86UF2 777 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 SFTPA1Q8IWL2 248 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 CTAGE4Q8IX94 777 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 SH2D3CQ8N5H7 860 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 CCDC89Q8N998 374 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 KCNV2Q8TDN2 545 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 MAML1Q92585 1016 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 VAT1Q99536 393 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 DDX47Q9H0S4 455 aaKnown RBP16.03■□□□□ 0.16
CDPF1-204ENST00000404744 MFSD1Q9H3U5 465 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 KLHL8Q9P2G9 620 aaPredicted RBP16.03■□□□□ 0.16
CDPF1-204ENST00000404744 THAP10Q9P2Z0 257 aaPredicted RBP16.03■□□□□ 0.16
CDPF1-204ENST00000404744 TTLL3Q9Y4R7 772 aa16.03■□□□□ 0.16
CDPF1-204ENST00000404744 TMCC1O94876 653 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 IFNB1P01574 187 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 HNRNPLP14866 589 aaKnown RBP eCLIP16.02■□□□□ 0.15
CDPF1-204ENST00000404744 RECQLP46063 649 aaPredicted RBP16.02■□□□□ 0.15
CDPF1-204ENST00000404744 RHOAP61586 193 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 IFI35P80217 286 aaPredicted RBP16.02■□□□□ 0.15
CDPF1-204ENST00000404744 MRPS21P82921 87 aaKnown RBP16.02■□□□□ 0.15
CDPF1-204ENST00000404744 C2orf54Q08AI8 447 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 SIGLEC14Q08ET2 396 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 SLC10A7Q0GE19 358 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 ZNF234Q14588 700 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 DLG2Q15700 870 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 PTPRNQ16849 979 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 TEX44Q53QW1 395 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 C2orf27AQ580R0 203 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 EMC10Q5UCC4 262 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 EGFLAMQ63HQ2 1017 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 PID1Q7Z2X4 250 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 CHPFQ8IZ52 775 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 FAM71DQ8N9W8 422 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 KDM1BQ8NB78 822 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 EDAQ92838 391 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 MRGPRX3Q96LB0 322 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 CEP44Q9C0F1 390 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 LTB4R2Q9NPC1 389 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 RBM12Q9NTZ6 932 aaKnown RBP16.02■□□□□ 0.15
CDPF1-204ENST00000404744 SUN2Q9UH99 717 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 AMACRQ9UHK6 382 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 SLCO3A1Q9UIG8 710 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 TRHDEQ9UKU6 1024 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.15
CDPF1-204ENST00000404744 ACTL7AQ9Y615 435 aa16.02■□□□□ 0.15
CDPF1-204ENST00000404744 NYNRINQ9P2P1 1898 aaKnown RBP16.02■□□□□ 0.15
CDPF1-204ENST00000404744 FAM170BA6NMN3 283 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 K7ERQ8 282 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 RNF103O00237 685 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 BNIP3LO60238 219 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 GAS8O95995 478 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 ALADP13716 330 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 PTPN3P26045 913 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 HSPA9P38646 679 aaKnown RBP16.01■□□□□ 0.15
CDPF1-204ENST00000404744 VASPP50552 380 aaPredicted RBP16.01■□□□□ 0.15
CDPF1-204ENST00000404744 CYTH1Q15438 398 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 ZNF572Q7Z3I7 529 aaPredicted RBP16.01■□□□□ 0.15
CDPF1-204ENST00000404744 SYNPOQ8N3V7 929 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 TEX26Q8N6G2 289 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 AGAP3Q96P47 875 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 KRT12Q99456 494 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 IL12RB2Q99665 862 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 CEP41Q9BYV8 373 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 TBC1D17Q9HA65 648 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 LMAN1LQ9HAT1 526 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 USP29Q9HBJ7 922 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 NT5MQ9NPB1 228 aa16.01■□□□□ 0.15
CDPF1-204ENST00000404744 FARP1Q9Y4F1 1045 aaPredicted RBP16.01■□□□□ 0.15
CDPF1-204ENST00000404744 SHISA7A6NL88 538 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 TTC34A8MYJ7 566 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 SMAD6O43541 496 aaKnown RBP16■□□□□ 0.15
CDPF1-204ENST00000404744 ATP9BO43861 1147 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 RNF40O75150 1001 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 ECEL1O95672 775 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 CD160O95971 181 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 PEX11BO96011 259 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
CDPF1-204ENST00000404744 KIR2DL1P43626 348 aaPredicted RBP16■□□□□ 0.15
CDPF1-204ENST00000404744 SNRPD1P62314 119 aaKnown RBP16■□□□□ 0.15
CDPF1-204ENST00000404744 CCINQ13939 588 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 ITPRIPL1Q6GPH6 555 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 TTC27Q6P3X3 843 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 RYBPQ8N488 228 aaPredicted RBP16■□□□□ 0.15
CDPF1-204ENST00000404744 ALLCQ8N6M5 410 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 PCDH20Q8N6Y1 951 aaKnown RBP16■□□□□ 0.15
CDPF1-204ENST00000404744 EZH1Q92800 747 aaPredicted RBP16■□□□□ 0.15
CDPF1-204ENST00000404744 ISG20Q96AZ6 181 aaKnown RBP16■□□□□ 0.15
CDPF1-204ENST00000404744 PSKH2Q96QS6 385 aa16■□□□□ 0.15
CDPF1-204ENST00000404744 CARD6Q9BX69 1037 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms