RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZBTB16Q05516 673 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 SLC10A2Q12908 348 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 MED1Q15648 1581 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 GPR162Q16538 588 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 RUNDC3AQ59EK9 446 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 ATG16L1Q676U5 607 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 MIS18BP1Q6P0N0 1132 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 SLC30A9Q6PML9 568 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 BRINP3Q76B58 766 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 UEVLDQ8IX04 471 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 ARL14EPQ8N8R7 260 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 OR52N4Q8NGI2 321 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 C2CD4CQ8TF44 421 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 COG3Q96JB2 828 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 TBATAQ96M53 351 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 PPP1R10Q96QC0 940 aaKnown RBP5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 ABCA3Q99758 1704 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 SCNM1Q9BWG6 230 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 QTRT1Q9BXR0 403 aaKnown RBP5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 CTDSP1Q9GZU7 261 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 TXNRD2Q9NNW7 524 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 ARL15Q9NXU5 204 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 C11orf21Q9P2W6 132 aa5.44□□□□□ -1.54
HMGB3P19-201ENST00000403971 SLIT3O75094 1523 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 INSRP06213 1382 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 KIF24Q5T7B8 1368 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 PHLPP1O60346 1717 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 TNS3Q68CZ2 1445 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 SMG6Q86US8 1419 aaKnown RBP5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 SAC3D1A6NKF1 404 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 MCIDASD6RGH6 385 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 DHX16O60231 1041 aaKnown RBP5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 PKMP14618 531 aaKnown RBP5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 RPS6KB1P23443 525 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 PPP2R1AP30153 589 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 ARHGAP25P42331 645 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 INHBEP58166 350 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 TLE2Q04725 743 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 POU5F1BQ06416 359 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 GXYLT1Q4G148 440 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 LIPMQ5VYY2 423 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 PTF1AQ7RTS3 328 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 PAF1Q8N7H5 531 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 IL17REQ8NFR9 667 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 ZFPM2Q8WW38 1151 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 IGFBPL1Q8WX77 278 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 HTRA1Q92743 480 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 NELL1Q92832 810 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 RNFT2Q96EX2 444 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 MASTLQ96GX5 879 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 GPR63Q9BZJ6 419 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 STN1Q9H668 368 aaKnown RBP5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 PGAP2Q9UHJ9 254 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 HSF4Q9ULV5 492 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 COL22A1Q8NFW1 1626 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 SHPRHQ149N8 1683 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 ABCC6O95255 1503 aa5.43□□□□□ -1.54
HMGB3P19-201ENST00000403971 ARHGEF10O15013 1369 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 RGPD5Q99666 1765 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 COL16A1Q07092 1604 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 A0A1B0GVC2 190 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 SMIM35A0A1B0GVV1 85 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 TCRBV7S3A2A0A539 114 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 CXorf65A6NEN9 183 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 C2CD4BA6NLJ0 364 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 C17orf100A8MU93 164 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 HOXC11O43248 304 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 CYP4B1P13584 511 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 TYK2P29597 1187 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 MVDP53602 400 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 FOXF2Q12947 444 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 TRPC3Q13507 836 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 TDGQ13569 410 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 PGM5Q15124 567 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 SUPT20HL1Q3ZLR7 823 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 SH2D4BQ5SQS7 431 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 MEX3CQ5U5Q3 659 aaKnown RBP5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 CCDC70Q6NSX1 233 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 DENND1BQ6P3S1 775 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 GALNT16Q8N428 558 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 PAQR4Q8N4S7 273 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 USP38Q8NB14 1042 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 NTN5Q8WTR8 489 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 KAT2AQ92830 837 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 KAT2BQ92831 832 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 HVCN1Q96D96 273 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 IL21RQ9HBE5 538 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 MOV10Q9HCE1 1003 aaKnown RBP5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 TMEM248Q9NWD8 314 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 DTX4Q9Y2E6 619 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 GDAQ9Y2T3 454 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 CDK12Q9NYV4 1490 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 NFAT5O94916 1531 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 COL18A1P39060 1754 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 PNPLA6Q8IY17 1366 aa5.42□□□□□ -1.54
HMGB3P19-201ENST00000403971 FAM208AQ9UK61 1670 aaKnown RBP5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 PEAK1Q9H792 1746 aa5.41□□□□□ -1.54
HMGB3P19-201ENST00000403971 CYP2D7A0A087X1C5 515 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms