RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 DEFB119Q8N690 84 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 NPWQ8N729 165 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 CASKIN2Q8WXE0 1202 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 FAM131CQ96AQ9 280 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 HSPA12BQ96MM6 686 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 SLC39A8Q9C0K1 460 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 BTBD1Q9H0C5 482 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 SGK2Q9HBY8 427 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 VPS45Q9NRW7 570 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 RCOR3Q9P2K3 495 aaPredicted RBP19.58■□□□□ 0.72
RTN4-207ENST00000402434 SERGEFQ9UGK8 458 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 FZD4Q9ULV1 537 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 NCKAP1Q9Y2A7 1128 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 CEP250Q9BV73 2442 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 TNRC6BQ9UPQ9 1833 aaKnown RBP19.57■□□□□ 0.72
RTN4-207ENST00000402434 METTL12A8MUP2 240 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 BUB1O43683 1085 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 FOXD2O60548 495 aaPredicted RBP19.57■□□□□ 0.72
RTN4-207ENST00000402434 KRT7P08729 469 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 ITPKAP23677 461 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 HOXD12P35452 270 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 DRD3P35462 400 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 DPP6P42658 865 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 CDH6P55285 790 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 ATP13A4Q4VNC1 1196 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 FAM46CQ5VWP2 391 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 DPY19L3Q6ZPD9 716 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 ARMCX6Q7L4S7 300 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 TMEM139Q8IV31 216 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 ARHGAP12Q8IWW6 846 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 KIAA2013Q8IYS2 634 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 TMIEQ8NEW7 156 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 OMDQ99983 421 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 NEUROG2Q9H2A3 272 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 TNKS2Q9H2K2 1166 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 TMEM74BQ9NUR3 256 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 PILRBQ9UKJ0 227 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 FCF1Q9Y324 198 aaKnown RBP19.57■□□□□ 0.72
RTN4-207ENST00000402434 PI4KAP42356 2102 aa19.57■□□□□ 0.72
RTN4-207ENST00000402434 A0A1W2PP55 124 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 BNIP3LO60238 219 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 CTSLP07711 333 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 AMPD1P23109 780 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 CHRNA3P32297 505 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 RECQLP46063 649 aaPredicted RBP19.56■□□□□ 0.72
RTN4-207ENST00000402434 METAP1P53582 386 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 CCDC6Q16204 474 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 CARD16Q5EG05 197 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 RAD9BQ6WBX8 426 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 CHST14Q8NCH0 376 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 PIP4K2CQ8TBX8 421 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 DNASE2BQ8WZ79 361 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 PIGKQ92643 395 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 CELF6Q96J87 481 aaKnown RBP19.56■□□□□ 0.72
RTN4-207ENST00000402434 BAG1Q99933 345 aaPredicted RBP19.56■□□□□ 0.72
RTN4-207ENST00000402434 PDFQ9HBH1 243 aa19.56■□□□□ 0.72
RTN4-207ENST00000402434 LUC7LQ9NQ29 371 aaKnown RBP19.56■□□□□ 0.72
RTN4-207ENST00000402434 ARHGAP42A6NI28 874 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 C10orf142B7Z368 130 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 C1QTNF3-AMACRE9PGA6 284 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 RNASEH2AO75792 299 aaKnown RBP19.55■□□□□ 0.72
RTN4-207ENST00000402434 SEMA4FO95754 770 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 PAPOLAP51003 745 aaKnown RBP19.55■□□□□ 0.72
RTN4-207ENST00000402434 PDK2Q15119 407 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 SYCP2LQ5T4T6 812 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 TMCO3Q6UWJ1 677 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 LEKR1Q6ZMV7 388 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 PRR23CQ6ZRP0 262 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 ZNF354CQ86Y25 554 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 HDDC3Q8N4P3 179 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 SPC24Q8NBT2 197 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 GANCQ8TET4 914 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 ETNK2Q9NVF9 386 aa19.55■□□□□ 0.72
RTN4-207ENST00000402434 A0A0A6YYK5 440 aaPredicted RBP19.54■□□□□ 0.72
RTN4-207ENST00000402434 TMEM110-MUSTN1A8MSY1 372 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 PRAMEF11O60813 436 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 GSRP00390 522 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 PRNPP04156 253 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 CD48P09326 243 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 SLC1A1P43005 524 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 DPYSL3Q14195 570 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 KRT81Q14533 505 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 WDR45BQ5MNZ6 344 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 LRRC38Q5VT99 294 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 KCTD6Q8NC69 237 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 OR2AP1Q8NGE2 309 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 HEPHQ9BQS7 1158 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 SMOC1Q9H4F8 434 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 C6orf106Q9H6K1 298 aaPredicted RBP19.54■□□□□ 0.72
RTN4-207ENST00000402434 TFR2Q9UP52 801 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 MFHAS1Q9Y4C4 1052 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 WASF2Q9Y6W5 498 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 J3KR12 359 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 TMCC1O94876 653 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 DNA2P51530 1060 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 CCNHP51946 323 aaPredicted RBP19.54■□□□□ 0.72
RTN4-207ENST00000402434 LMNB2Q03252 620 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 MMRN1Q13201 1228 aa19.54■□□□□ 0.72
RTN4-207ENST00000402434 SF3A2Q15428 464 aaKnown RBP19.54■□□□□ 0.72
RTN4-207ENST00000402434 MAP7D3Q8IWC1 876 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms